Query= MSMg01no422_b11.b1 MSMg01no422_b11.b1 CHROMAT_FILE:
MSMg01no422_b11.b1 PHD_FILE: MSMg01no422_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:28 2005
(622 letters)
>mm_chr1_61811471_61812491
Length = 1021
Score = 1106 bits (572), Expect = 0.0
Identities = 602/612 (98%), Gaps = 1/612 (0%)
Strand = Plus / Plus
Query: 11 tcctactttacggtatttttattgtttgattgttgttgttttaactttttcctattttta 70
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 211 tcctactttatggtatttttattgttagattgttgttgttttaactttttcctaatttta 270
Query: 71 aattagaacttagctttccctttccttctgtttttacctcttacaaggaagtaaggaaga 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aattagaacttagctttccctttccttctgtttttacctcttacaaggaagtaaggaaga 330
Query: 131 ctcaatgggtctggcagttgttaatgatgattgtctagttatgggttacatggactactc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctcaatgggtctggcagttgttaatgatgattgtctagttatgggttacatggactactc 390
Query: 191 ttacaaactgaacccaagggaagagaaactggtagcattcttctttgaagtagtcctatt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttacaaactgaacccaagggaagagaaactggtagcattcttctttgaagtagtcctatt 450
Query: 251 taaagagacattttcagaatgctttctcttttacaattatggtgtgctggttaattgtag 310
|||||||| ||||||||||||| ||| |||||||| |||||| |||||||||||||||||
Sbjct: 451 taaagagatattttcagaatgc-ttcccttttacagttatggcgtgctggttaattgtag 509
Query: 311 aaagggagtactggctgtgtcaacaacacaaactagagacatctaagaagaagtaacctt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aaagggagtactggctgtgtcaacaacacaaactagagacatctaagaagaagtaacctt 569
Query: 371 atttgaggattttttagatgagattggcaggtctgggtctggagggcatttgaatgattg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atttgaggattttttagatgagattggcaggtctgggtctggagggcatttgaatgattg 629
Query: 431 ctaattgaagtagatcagcccaggtcactgtgggcactgtaggtctgggcaggtgcccat 490
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 630 ctaattgaagtagatcagcccaggtcactgtggtcactgtaggtctgggcaggtgcccat 689
Query: 491 ggactatacaagaaaggcagtggctggtgagcctaggagccagccagtgagcagcagcca 550
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 690 ggactatacaagaaaggcagtggctggtgagcctaggagccagccagtgagtagcagcca 749
Query: 551 atgagtagcagccagtgagcagcattcctccctgacctcttcagcctgcctccaggttcc 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 atgagtagcagccagtgagcagcattcctccctgacctcttcagcctgcctccaggttcc 809
Query: 611 tacctcagcttc 622
||||||||||||
Sbjct: 810 tacctcagcttc 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space: 618732
Effective search space used: 618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_b11.g1 MSMg01no422_b11.g1 CHROMAT_FILE:
MSMg01no422_b11.g1 PHD_FILE: MSMg01no422_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:28 2005
(588 letters)
>mm_chr1_61923876_61924863
Length = 988
Score = 1098 bits (568), Expect = 0.0
Identities = 583/588 (99%)
Strand = Plus / Minus
Query: 1 tttatgtttgataatcagcatttacaagatacctattgtcctataacaaaatatcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tttatgtttgataatcagcatttacaagatacctattgtcctataacaaaatatcagaga 729
Query: 61 agatggcattttgtggcacaaggatggagatgaatataaaaactaaaaacagctgaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agatggcattttgtggcacaaggatggagatgaatataaaaactaaaaacagctgaaatc 669
Query: 121 tacccacaactgtgaactctggtgggtgttgcttcagaggggagggacccaaaggcaaga 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tacccacagctgtgaactctggtgggtgttgcttcagaggggagggacccaaaggcaaga 609
Query: 181 gtgtatgggaatagatggagctgaaggttagaatttatctacatgtcctaactgatattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gtgtatgggaatagatggagctgaaggttagaatttatctacatgtcctaactgatattt 549
Query: 241 tgaccctatttattaaatcataatatgcaaggccatttcaaatgagcatctccactgtgg 300
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tgaccctaaagataaaatcataatatgcaaggccatttcaaatgagcatctccactgtgg 489
Query: 301 ctcagtgatttcctgaaaggctatcctactgcttcaagatcccattattaatggaaggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ctcagtgatttcctgaaaggctatcctactgcttcaagatcccattattaatggaaggga 429
Query: 361 ttaggagaaaaatatgctccccattacacagcatgggacacatttaatgagctgactctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttaggagaaaaatatgctccccattacacagcatgggacacatttaatgagctgactctg 369
Query: 421 ttttttctatttcctatctcccagtatttattcaatgccatcaatgggagtcacattcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttttttctatttcctatctcccagtatttattcaatgccatcaatgggagtcacattcaa 309
Query: 481 ttcagaataaccagtgacaagctatgtaacaatacaagaaacatgtttactatatagata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttcagaataaccagtgacaagctatgtaacaatacaagaaacatgtttactatatagata 249
Query: 541 taaatgagctaaaggaaacgtatttgagttgaactttcaaaattcatt 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 taaatgagctaaaggaaacgtatttgagttgaactttcaaaattcatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
