Query= MSMg01no422_i11.b1 MSMg01no422_i11.b1 CHROMAT_FILE:
MSMg01no422_i11.b1 PHD_FILE: MSMg01no422_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:59 2005
(242 letters)
>mm_chr1_54580376_54581018
Length = 643
Score = 412 bits (213), Expect = e-119
Identities = 234/241 (97%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 3 gaagggctctgcagtagggcagtgaatatttcaatgagacattgcgcaactttctagatt 62
||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 443 gaagggctctgcagtagggcagtgagcatttcaatgagacattgcgtaactttctagatt 384
Query: 63 acatcacatggtggttaagcaattgggtaactcttgtggctagttctgcagagtggtata 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 383 acatcacatggtggttaagcaattgggtaactcttgtggctagttctgcagagtggtaaa 324
Query: 123 tcatagcacagatttatttaataatggttagtgatttccttaagtaactccactatttta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 323 tcatagcacagatttatttaataatggttagtgatttccttaagtaactccactaagtta 264
Query: 183 tcaagttgttgg-tttttttttttaagatttattgatttattttgtgaatgtgagtactg 241
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcaagttgttgggtttttttttttaagatttattgatttattttgtgaatgtgagtactg 204
Query: 242 t 242
|
Sbjct: 203 t 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_i11.g1 MSMg01no422_i11.g1 CHROMAT_FILE:
MSMg01no422_i11.g1 PHD_FILE: MSMg01no422_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:59 2005
(232 letters)
>mm_chr1_54342791_54343422
Length = 632
Score = 395 bits (204), Expect = e-114
Identities = 225/232 (96%)
Strand = Plus / Plus
Query: 1 aagcccatcaggttggcaacaagattatgtattggtgggatgttccgtccctccctcagc 60
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 aagcccatcaggttgacaacaagattatgtattggtgggatgccccgtccctccctcagc 260
Query: 61 acatttctaaggagctccacagcaagggttatacgttaaagtggttgttctgttgaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatttctaaggagctccacagcaagggttatacgttaaagtggttgttctgttgaatgg 320
Query: 121 tctgtgtcagacagcacagtagacataataaatgcttgtttgctgtgagatttatgtatt 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 tctgtgtcagacagcacagtagacataataaatgtttgtttgctgtgagatttatgtatg 380
Query: 181 atcattttctacaaggagctgtgcacaaatgtgacgcatactttctattaat 232
| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 agcattttctacaaggagctgtgcacaaatgtgacgtatactttctattaat 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
