XXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAGGAGGCGCGGAATTCTGTA
AGTTTGACAAGAAAGGGCTATTATTTTCTTCTCCTGACACAATAGAAGGC
TTTTTTCTTCCCCCTTTCCTTTCCTTCTTTCTTTCTTTGTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGTTCTTTGT
TTCTGTCTGTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCCTTC
CTTCCTTCCTTCCTCCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCC
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCATGGGTGAATAGGTATA
ACCAAGGAAGAAGCAAGTGGTTTCCTATTCTCCAAGAAATGGGGGAAATT
TCTCTAGTTTCACTGGAAANNNGGGAAAANNNNNTTNTNTCNTCCTATAA
TTTAACCACTAAATGTAAAAATATAAATTGGAAATTCGATAAGTTAAAAA
TATGTAAAAAAAAACGACAAAAATAAGAAAAGTGATAGAGTTTTTACAAA
AAAAGACGATAATCTGTTAGGATACAGATAAGTATAATAATAGCAAAACC
AGAAGAGTGATAATGATGCTTGGTTATTAGAAAAAGTTATCATCCGTTGT
ATGACAATATGTGTGCAGTACGAACGATATATATCAACCTCCGATAGAAG
ACGGAGTTTGTATAGAGAGCGGAGATGGCTGTATAATTTATAGTAG

TTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTCAAAGCTAGTTGAATGTTAGTGGCTTCAG
TAGGCATCAAGACTAGTTTTCTATAAGCTGTTATTTATTGCCCAGCCCTA
ATTAAGGTGGAGACATAAGAGGGGGCCACAGGGTACCCATTTCATCATGT
CCCTAGTCTCCAGTTAACAGCAGCAGTTCCAAAGTCAAACAAGCAAGTGT
TGAAAATGTGGAACTTTTTGACTCCCAATGCTCCGTGCTTTCCATGTTCT
TTGAAATGACTTAAGAGAAGACAGGGCGGGGTTAAGAAATGATCAGGGGT
AGTGTGAATGACAGAACTCTTGTGTTTGGAAGTCCCCTTGTGTATGTCAA
CCCTCGCAGAAAGGCAGGTGATGGGGGCTGAAGAGACAGGTATCTCAGCG
TTAAGAATGTATACTGTCTTGTCGATGACTAGCTCACAGCCGCCTGTAAT
TCCAGCTCCTGGAGATGCAATACCCCCTTCTGGCTTTCATGGCCATTCAC
AAACATGTATCATGCACTCGAACAAGCACACATTAAAACAAGACAAAATG
AATCTTANAAAAAAAATAGGAAAAGAAATGTTAATGATGGAATTTCCGAG
CAGAGGTGCACAGAGTGAACTCAGAGAGGCCAGGATAGGGAGGCGCTTCT
GACCTATGACCAGAGGACCATCTGCTCCTGGCCGG

Query= MSMg01no422_m02.g1 MSMg01no422_m02.g1 CHROMAT_FILE:
MSMg01no422_m02.g1 PHD_FILE: MSMg01no422_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:16 2005
         (534 letters)



>mm_chr1_62853038_62853968
          Length = 931

 Score =  977 bits (505), Expect = 0.0
 Identities = 526/535 (98%), Gaps = 5/535 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcaaagctagttgaatgttagtggcttcagtaggcatcaagactagttttctataagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcaaagctagttgaatgttagtggcttcagtaggcatcaagactagttttctataagc 260

                                                                       
Query: 61  tgttatttattgcccagccctaattaaggtggagacataagagggggccacagggtaccc 120
           |||||||    |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 tgttatt----gcccagccctaattaaggtggagacataagagggggccacggggtaccc 316

                                                                       
Query: 121 atttcatcatgtccctagtctccagttaacagcagcagttccaaagtcaaacaagcaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atttcatcatgtccctagtctccagttaacagcagcagttccaaagtcaaacaagcaagt 376

                                                                       
Query: 181 gttgaaaatgtggaactttttgactcccaatgctccgtgctttccatgttctttgaaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gttgaaaatgtggaactttttgactcccaatgctccgtgctttccatgttctttgaaatg 436

                                                                       
Query: 241 acttaagagaagacagggcggggttaagaaatgatcaggggtagtgtgaatgacagaact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acttaagagaagacagggcggggttaagaaatgatcaggggtagtgtgaatgacagaact 496

                                                                       
Query: 301 cttgtgtttggaagtccccttgtgtatgtcaaccctcgcagaaaggcaggtgatgggggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 497 cttgtgtttggaagtccccttgtgtatgtcaaccctcgcagaaaggcagatgatgggggc 556

                                                                       
Query: 361 tgaagagacaggtatctcagc-gttaagaatgtatactgtcttgtcgatgactagctcac 419
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgaagagacaggtagctcagctgttaagaatgtatactgtcttgtcgatgactagctcac 616

                                                                       
Query: 420 agccgcctgtaattccagctcctggagatgcaatacccccttctggctttcatggccatt 479
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 617 agccgcctgtaattccagctcctggagatgcaatacccgcttctggctttcatggccatt 676

                                                                  
Query: 480 cacaaacatgtatcatgcactcgaacaagcacacattaaaacaagacaaaatgaa 534
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cacaaacatgtatcatgcactcgaacaagcacacattaaaacaagacaaaatgaa 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 931
Length adjustment: 10
Effective length of query: 524
Effective length of database: 921
Effective search space:   482604
Effective search space used:   482604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)