XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCCAAT
CTTTCCAGGCCATGAAAAAAGTCTTAGTACATTTTAAGATATTGAATTAT
CCAGTATTATTTCCAACTATAAGTTGAATTAACCTGGAAATCAGTAACAA
AACTGTGGACATTATATACAATTACATGTAAGTTAACAACTTAAGAATAA
TCAATGGAATAAAGAAATATTAAATTTCTCAAAACAAATACAAAGAAAAC
CACAAAATGCCTACACTGACAGAATGCAGCAGAAGCAGTAGAAAGAGGAA
GCATATAGCAACAAATGAGCACACCAAAAAAGCAGTGCGAGTGAGTGCTG
CTCTTCCAGAGGATCCAAGATTGTTTTCTCAGCAACACATGGCTCATGAC
CACCTGTAACTCTAGCTCCAGGATATCTGCTGCCCTCTTCTGGTCTCCAT
GGGCTCACATACACATGTTTATTCATATAAACATGAATAAAAATAAAATC
TTTTAAAAAACTAAACAAAACAAACCCCACAAAACTAGACTATGGAACTG
GCAAGGTGGCTTAGATAGAGTTAAGGCACTTGGCACTATCTCTGACCACC
TCACTTTGATCCCTGAAATTAAGAAGTGAAGAGAATTGATTAGGGCCAGT
AATCCCTTTGACCTCCACTTGCGGATCTCCACATGTGGCACACCCGGGAA
AATAACCAACCACACCCACCTATTCTTGGCCCACCTACCCTTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTTCTAAGTATTTTGCTGAAAGTGTTTTACTTTGCT
TTTGTTTTGAAGAATAATTTGTTGCTGAGAGAGTTTATCTGGCCACAGGA
TTTAGGTTGATAATGACTTTCTTGCAGAACTCAGAAGATCTGCCCACCTT
CTATCATCTGTCATCATCTCTTCAAAGGTCTCCGACCAACAGAGCCTGGA
GGTGCACACCTTTGATCCAACCACTCAGGAGTCAGAGGCAAGAGGAATAG
TGAGAATTTGAGTTTTTTTCTCAATTGTATTGAGTTCCAGAGAGGCCCTG
TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT
TTTCTTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAA
CTCACTTTGTAGACCAGGCCGGTGTCGAACTCAGAAATCCGGCTGCCTCT
GCCTCCCAAGTGCTGAGATTAAAGGCGTGTGCCACCATCTTCCGGCGAGG
TCCTGTTTCAATTTTTAAGCATGTTAAAATCTCCCAGCCGCCAAAGCAGG
TTTTTTTTTGTTAGCACCTTATATTAATCCTAAAGTTGGTTTTTATATGC
TTTAATCTTTGACTCCCGGAAATTTTCTTAAATAACTTCTTTTGCGTGAC
GTTCTTTCACTCTTTTCGGTTTAAAACTTGGGGTTTCTCTGTTGTTT

Query= MSMg01no422_n08.g1 MSMg01no422_n08.g1 CHROMAT_FILE:
MSMg01no422_n08.g1 PHD_FILE: MSMg01no422_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:22 2005
         (422 letters)



>mm_chr1_161081313_161082134
          Length = 822

 Score =  669 bits (346), Expect = 0.0
 Identities = 414/468 (88%), Gaps = 52/468 (11%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctaagtattttgctgaaagtgttttactttgcttttgttttgaagaataatttgttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tttctaagtattttgctgaaagtgttttactttgcttttgttttgaagagtaatttgttg 260

                                                                       
Query: 61  ctgagagagtttatctggccacaggatttaggttgataatgactttcttgcagaactcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagagagtttatctggccacaggatttaggttgataatgactttcttgcagaactcag 320

                                                                       
Query: 121 aagatctgcccaccttctatcatctgtcatcatctcttcaaaggtctccgaccaacagag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagatctgcccaccttctatcatctgtcatcatctcttcaaaggtctccgaccaacagag 380

                                                                       
Query: 181 cctggaggtgcacacctttgatccaaccactcaggagtcagaggcaagaggaatagtgag 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 cctggaggtgcacacctttgatccaaccactcaggaggcagaggcaagaggaatagtgag 440

                                                                       
Query: 241 aatttgag--ttttttt---ctcaattgtattgagttccagagaggccctgttt-ctttt 294
           ||||||||  |         |||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 aatttgaggct------agcctcaattgtattgagttccagagaggccctgttttctttt 494

                                                                       
Query: 295 cttttcttttcttttcttttcttttcttttcttt-------------------------- 328
           ||||||||||||||||||||||||||||||||||                          
Sbjct: 495 cttttcttttcttttcttttcttttcttttctttcctttcctttcctttccttttctttt 554

                                                                       
Query: 329 --------------tcttttcttttcttttttcgagacagggtttctctgtatagccctg 374
                         ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cttttcttttcttttcttttcttttcttttttcgagacagggtttctctgtatagccctg 614

                                                           
Query: 375 gctgtcctggaactcactttgtagaccaggccggtgtcgaactcagaa 422
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gctgtcctggaactcactttgtagaccaggccggtgtcgaactcagaa 662


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space:   335769
Effective search space used:   335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)