ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCAAGGTATATGGCATTACTTGGAATATATTTGGTTTTGATTTTATTT
TAAAATTTTTTAAGCTAATATTCTTACAATGCTATATACAGGTCAAGTGT
AGACCGACATAATAAACAGTTATATTGTGAAGTGACTGTATCCTGATTGG
TCCATTAATAAGTTCACAGCTGAATCGAATATTAGGAGGCAGGACCTTGC
TGGAGGACAGAGGTTCCTGTGGTATGCCTTTAAAGGTAAGCCTACTTCTT
GTGTGTTGCTCTCACTTGCAGCTTCCTAAATGCATAAGGTGAGGTGATGG
GCTTTCCTACACCATGCCCTTCTGCCACAGTGGACGTACTGTCTTATCAA
TGGCCCAGAAACAGAACAGGCTAACCAGACTTGAAACCATAAACAACAAC
AAAAATATATTTTTCCTTCTTTTAAATTTCTCATGTAATTTTCACAACAA
AGGGAAAGCTCATAAATAAATATGTTATTAAAATTTATTTAAACAGACAA
ACCTATCTAGTCATTCCAGGATCTAAAGTTTTATAGTTTTCCTGAAAGTT
TTAAGGCAAACACAACAAATGATCCTTGTAAATGAAGAGAGAGGCAGGAG
TCTGTTAAGGTTGGGGTGAGGGAAACATGGTTTTCTTACTGAGAATAAAC
TTACATTGTCTTGCTCTGTGCGAAAGGCACCATACCAACTCTAATGGTGA
AN

TCAGGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATG
GCAGAAAAGTACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAAT
GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTA
AGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTG
GAAATCAGTCTGGCGGTTCCTCTTAAAATTGGACATAGTACTACCGGAGG
ATCCAGCAATACCTCTCCTGGGCATTTATCCAGAAGATGCCCCAACTGTT
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAATGAATG
AATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTAACACATTCACAAAGGAACTCACACTATATGTACTCACTGAT
TAGGGGATATTAGCCCCAAATCTCGGATTCCCAAGACATAAGGGATTATT
TGTTAACACTTCTGAATCTCTCGAAGAATGAAAACTGAAGTGTGG

Query= MSMg01no424_c03.b1 MSMg01no424_c03.b1 CHROMAT_FILE:
MSMg01no424_c03.b1 PHD_FILE: MSMg01no424_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:00 2005
         (615 letters)



>mm_chr1_179701342_179702355
          Length = 1014

 Score = 1145 bits (592), Expect = 0.0
 Identities = 607/612 (99%), Gaps = 2/612 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccaaggtatatggcattacttggaatatatttggttttgattttattttaaaat 63
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattccaaggaa-atggcattacttggaatatatttggttttgattttattttaaaat 263

                                                                       
Query: 64  tttttaagctaatattcttacaatgctatatacaggtcaagtgtagaccgacataataaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttttaagctaatattcttacaatgctatatacaggtcaagtgtagaccgacataataaa 323

                                                                       
Query: 124 cagttatattgtgaagtgactgtatcctgattggtccattaataagttcacagctgaatc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagttatattgtgaagtgactgtatcctgattggtccattaataagttcacagctgaatc 383

                                                                       
Query: 184 gaatattaggaggcaggaccttgctggaggacagaggttcctgtggtatgcctttaaagg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaatattaggaggcaggaccttgctggaggacagaggttcctgtggtatgcctttaaagg 443

                                                                       
Query: 244 taagcctacttcttgtgtgttgctctcacttgcagcttcctaaatgcataaggtgaggtg 303
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taagcctacttcttgtgtgctgctctcacttgcagcttcctaaatgcataaggtgaggtg 503

                                                                       
Query: 304 atgggctttcctacaccatgcccttctgccacagtggacgtactgtcttatcaatggccc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 atgggctttcctacaccatgcccttctgccacagtggacgtactgtcttatcactggccc 563

                                                                       
Query: 364 agaaacagaacaggctaaccagacttgaaaccataaacaacaacaaaaatatatttttcc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agaaacagaacaggctaaccagacttgaaaccataaacaacaacaaaaatatatttttcc 623

                                                                       
Query: 424 ttcttttaaatttctcatgtaattttcacaacaaagggaaagctcataaataaatatgtt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcttttaaatttctcatgtaattttcacaacaaagggaaagctcataaataaatatgtt 683

                                                                       
Query: 484 attaaaatttatttaaacagacaaacctatctagtcattccaggatctaaagttttatag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 684 attaaaatttatttaaacagacaaacctatctagtcattccaggatctaaagttt-atag 742

                                                                       
Query: 544 ttttcctgaaagttttaaggcaaacacaacaaatgatccttgtaaatgaagagagaggca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttttcctgaaagttttaaggcaaacacaacaaatgatccttgtaaatgaagagagaggca 802

                       
Query: 604 ggagtctgttaa 615
           ||||||||||||
Sbjct: 803 ggagtctgttaa 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1014
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1004
Effective search space:   607420
Effective search space used:   607420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)