Query= MSMg01no424_g10.b1 MSMg01no424_g10.b1 CHROMAT_FILE:
MSMg01no424_g10.b1 PHD_FILE: MSMg01no424_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:21 2005
(622 letters)
>mm_chr1_23217460_23218481
Length = 1022
Score = 1125 bits (582), Expect = 0.0
Identities = 609/622 (97%), Gaps = 8/622 (1%)
Strand = Plus / Plus
Query: 5 gaattcttttcttccctcctcccctcccttctcccagcattcactgtaacttacattttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttcttccctcctcccctcccttctcccagcattcactgtaacttacattttt 264
Query: 65 attgctgatactgtgtacctgctttcatcatctacttctctggaacagtcattctagaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 attgctgatactgtgtacctgctttcatcatctacttctctggaacagtcaatctagaac 324
Query: 125 ttgatagtacatctagaactcgagaaatgttgctggttgttcaaccttacattcaccaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgatagtacatctagaactcgagaaatgttgctggttgttcaaccttacattcaccaaa 384
Query: 185 tacagcacactaccatgtgagcacactgtaataattagtgttgtcaacaggacaagatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacagcacactaccatgtgagcacactgtaataattagtgttgtcaacaggacaagatca 444
Query: 245 gacctgggagggatcatcctgattatgttgagatggggaggaacaccctgagagtggaca 304
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 gacctgggagggatcatcct----atgttgagatggggaggaacaccctgagagtggaca 500
Query: 305 gcaccatttcttgggcttgaaccctgtctcagttagggttttactgctgtgaacagaccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaccatttcttgggcttgaaccctgtctcagttagggttttactgctgtgaacagaccc 560
Query: 365 catgaccaaggcaactcttacaacatttaattaaggctggtttacaggttcagaggttca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgaccaaggcaactcttacaacatttaattaaggctggtttacaggttcagaggttca 620
Query: 425 gtacatcatcatcaaggcaggagcatggcagcatttcaggcaggtatggtgtaggaggag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtacatcatcatcaaggcaggagcatggcagcatttcaggcaggtatggtgtaggaggag 680
Query: 485 ctgagaattctatctcttcatctgaaggctgctagcagaatactgacttcaaggctgcta 544
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgagaattctatatcttcatctgaaggctgctagcagaatactgacttcaaggctgcta 740
Query: 545 ggatgagggtttttaagt----gcctacagtgatacacctactccaacaaggtcatacct 600
|||||||||||||||||| ||||||||||| ||||||||||||| |||| |||||||
Sbjct: 741 ggatgagggtttttaagtccatgcctacagtgacacacctactccaataaggccatacct 800
Query: 601 ccgaatagtgccacttcctggg 622
||||||||||||||||||||||
Sbjct: 801 ccgaatagtgccacttcctggg 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_g10.g1 MSMg01no424_g10.g1 CHROMAT_FILE:
MSMg01no424_g10.g1 PHD_FILE: MSMg01no424_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:21 2005
(381 letters)
>mm_chr1_23380840_23381620
Length = 781
Score = 729 bits (377), Expect = 0.0
Identities = 380/381 (99%)
Strand = Plus / Minus
Query: 1 tcctcactttggtaaaaggagtaaaatattagtgttgaggcctccatttccttggttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tcctcactttggtaaaaggagtaaaatattagtgttgaggcctccatttccttggttgta 522
Query: 61 agtaacactgttaaattaggaggttcacccgaagctttgaaactatggacataaagcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agtaacactgttaaattaggaggttcacccgaagctttgaaactatggacataaagcgtt 462
Query: 121 aggtcctgactggagactcactggcttatacctcaggtgaaagtttgctacgtaagctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aggtcctgactggagactcactggcttatacctcaggtgaaagtttgctacgtaagctaa 402
Query: 181 tgtcagcacaagacaggcctctgcctatctaatgcagataaccatatctggatggtttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgtcagcacaagacaggcctctgcctatctaatgcagataaccatatctggatggtttct 342
Query: 241 ctgtcttactgttgaagaaggctatctgcaagtaaggctttggcaaacagtggtcacacc 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctgtcatactgttgaagaaggctatctgcaagtaaggctttggcaaacagtggtcacacc 282
Query: 301 tcaccctttgggtgcccacctctatccttttgttatttttgcttggaatgacatgcttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcaccctttgggtgcccacctctatccttttgttatttttgcttggaatgacatgcttgt 222
Query: 361 ttggtacgttgttgttgaagt 381
|||||||||||||||||||||
Sbjct: 221 ttggtacgttgttgttgaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
