Query= MSMg01no424_h21.b1 MSMg01no424_h21.b1 CHROMAT_FILE:
MSMg01no424_h21.b1 PHD_FILE: MSMg01no424_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:28 2005
(525 letters)
>mm_chr1_128280142_128281066
Length = 925
Score = 951 bits (492), Expect = 0.0
Identities = 516/524 (98%), Gaps = 3/524 (0%)
Strand = Plus / Plus
Query: 4 ggaattccatttc-ttcggtataaaattttgcttttgtttttagtagatagtaaaataca 62
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccatttcatt-ggtataaaattttgcttttgtttttagtagatagtaaaataca 261
Query: 63 tatacactgaagaattgtttttaaacaaatagctgtgatttataatcagtttgtgtttta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tatacactgaagaattgtttttaaacaaatagctgtgatttataatcagtttgtgtttta 321
Query: 123 ttttatatacctgtatatctatggtcatataaaatgtctgtctaaaaggggtcctgatt- 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttttatatacctgtatatctatggtcatataaaatgtctgtctaaaaggggtcctgatta 381
Query: 182 aaaaagaataataattagccctgagtgagaacacagagttaagaagaaaaatgctcaaga 241
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 382 aaaaaaaataataattagccctgagtgagaatacagagttaagaagaaaaatgctcaaga 441
Query: 242 gctggttttaattttgtccaaccagtttttcagaggttcaaaacagaccaagtctgtctg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 442 gctggttttaattttgtccaaccagtttttcagaggttcaaaacagaccaagtctgtttg 501
Query: 302 attgcttttaaaatctttgccaaaccaggagatctcacaaatggacacacataactgaca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attgcttttaaaatctttgccaaaccaggagatctcacaaatggacacacataactgaca 561
Query: 362 gaactgtcctgcacacagctcagctcctccatataatatgaactctgccacagcaatgct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaactgtcctgcacacagctcagctcctccatataatatgaactctgccacagcaatgct 621
Query: 422 gtccccagtgccctgtttatgttattggttttcaacagcaacactactgtggttattgct 481
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 622 gtccccagtgccctgtttatgttattggttttcaacagcaacactaaagtggttattgct 681
Query: 482 gctaaatggaacactgagtacagattatacaatgttatggtgtt 525
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gctaaatggaacactgagtacagattatacaatgttatggtgtt 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_h21.g1 MSMg01no424_h21.g1 CHROMAT_FILE:
MSMg01no424_h21.g1 PHD_FILE: MSMg01no424_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:28 2005
(492 letters)
>mm_chr1_128414930_128415821
Length = 892
Score = 828 bits (428), Expect = 0.0
Identities = 434/438 (99%), Gaps = 4/438 (0%)
Strand = Plus / Minus
Query: 55 cttgttgttaagcttggtgacatgagttccgtttctgggacccacataggagaaggagag 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 cttgttgttaagcttggtgacatgagttccgtttctgggacccacataggagaaggagag 833
Query: 115 acctgattcccattgtttgccttcagacctccacagatacagaatggcacatacacatat 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 acctgattcccattgtttgccttcagacctccacagatacagaatggcacatacacatat 773
Query: 175 acacatacagactatgttaaagtgatatttttttaaaacttgcttttgtatttatttatt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 acacatacagactatgttaaagtgatatttttttaaaacttgcttttgtatttatttatt 713
Query: 235 tattgtttgtttgtttgtttgtttctgtctctatgtctaaaataatattaaaactgcctg 294
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ta----ttgtttgtttgtttgtttctgtctctatgtctaaaataatattaaaactgcctg 657
Query: 295 ctggaagctatgagaagtttgtaatgctctattgaaaaggttggcttgcacttgtaaagc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctggaagctatgagaagtttgtaatgctctattgaaaaggttggcttgcacttgtaaagc 597
Query: 355 acaggtacgaacaagaattaatcctgtttagcatcagtctctgactatcccagagattct 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 acaggtacgaacaagaattaatcctgtttagcatcagtctctgactatcccagagattct 537
Query: 415 catcccatgtatcttggctcttattttattcagcctcttcacgtgttagtatgcctcttt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 catcccatgtatcttggctcttattttattcagcctcttcacgtgttagtatgcctcttt 477
Query: 475 cctcatggggttaatgca 492
||||||||||||||||||
Sbjct: 476 cctcatggggttaatgca 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
