Query= MSMg01no424_k19.b1 MSMg01no424_k19.b1 CHROMAT_FILE:
MSMg01no424_k19.b1 PHD_FILE: MSMg01no424_k19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:41 2005
(239 letters)
>mm_chr1_36011958_36012596
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Minus
Query: 1 ccatctgcttgtcaagcatcatctagagactcctaggagctaggtacccaggctccagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccatctgcttgtcaagcatcatctagagactcctaggagctaggtacccaggctccagaa 380
Query: 61 gacaataacctctgtccatagaccttccagatcgcaggccaccatgccagttagctttca 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gacaataacctctgcccatagaccttccagatcgcaggccaccatgccagttagctttca 320
Query: 121 gtcactgcgacaaatacctgagatagaaaacttgtaaggaagaaagctttgctctgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtcactgcgacaaatacctgagatagaaaacttgtaaggaagaaagctttgctctgttgc 260
Query: 181 acaaagccaccacacttactttagggaatggatttgtgtcctagattttggagtctcag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acaaagccaccacacttactttagggaatggatttgtgtcctagattttggagtctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no424_k19.g1 MSMg01no424_k19.g1 CHROMAT_FILE:
MSMg01no424_k19.g1 PHD_FILE: MSMg01no424_k19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:41 2005
(258 letters)
>mm_chr1_35869368_35870025
Length = 658
Score = 470 bits (243), Expect = e-137
Identities = 251/257 (97%), Gaps = 6/257 (2%)
Strand = Plus / Plus
Query: 1 tctggataaggaatgtgtgactccaggtacataggaggaggggcacccatttttaagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggataaggaatgtgtgactccaggtacataggaggaggggcacccatttttaagagt 260
Query: 61 gaaagagtgtgggccacctgtagccctctgatatctggcaagcaagtctagaaacctcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagagtgtgggccacctgtagccctctgatatctggcaagcaagtctagaaacctcct 320
Query: 121 cagggtggcaaaaatggtgcttgtcattctcctagaatacaggcacctggggagtatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagggtggcaaaaatggtgcttgtcattctcctagaatacaggcacctggggagtatgtt 380
Query: 181 tataacctcacaaaaaatgttctgggcaagggttttgttgttgttgttgttgttgttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tataacctcacaaaaaatgttctgggcaagggttttgttgttgttgttgttgttgttgtt 440
Query: 241 ------ttgatgggttt 251
|||||||||||
Sbjct: 441 gttgttttgatgggttt 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|