GAAATCATAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTTTTACTTTCAAAGAGCCAATACCATTATTCCTCAAAAC
ATTACAAAAAACAGAATCAGAAGTATCATTTCCAAACTCATTTTATGCGT
CACTCTTATTCCTACCCCACACACAAACTCAACAAAGAGAATTTAAGACC
AATTTTTCTTATAAACATTGATTCCAAAATACTCAGTAAAGTACTCTCAG
CAGAAATCCAAAACCACCATATTCCATGATCAAGTAGGTATCATCCTAGT
TATTCAGGGGTGGTTCAATATATGATAATCCATCAAGACAGTCCACCATA
TAAACAAACTGAAAGAAAAAAAATCATGATTTGATACTGAAAAAAAATCC
AACATGTCTTCATGGTAAAACTCTCAGGGATATCAGGGATAAAAGGCACA
TACCAAAAAATAATACATGCAGCACACGGCAAGCTAATAGTCTACATCAA
ATTAAATGGAGAGAAAAATTAAAACATGCCATTAAAATCAGGAATAAATC
AAGAATGTGAACTCTCTCCATATATTTTCAATATTTTATCTGAATTTTTA
GCTAAAGCAGTAAGACAACTAAAGGAAATGAAGGGGATACAGGTCAGCAA
CGAAAAAGACAAAGTATCTCTATTCATTGATGATTAGACAGGTAAAATAA
GTAACCCCAGCATTTCTACCAGAGGACTACT

NCCAGTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGCCTAAATTAATG
TGAAATCAAACTAGAATAAATCACTAAGTTGGGCACACAATGGATTTCAT
TCTTAACCTGGAGAATGCTCTAAAACTAGGAAGTAGATTGACTGTGTGGA
AATGACCTCCTTCCCAAATAGATGAATTTACTAATATGAAATCTACACAA
TGTGTGACTCATCCAGATACTGAAGACAGAATTATTTCAGCTTCTGCCCC
ACCTACTATTTTCACCTAAAAGTTCTTTTTGCCTTCTTGTACAAATATAA
GTCTTAGGGAAGCACCCTCCTAGACCTTCTTTATTTCTGACCTCAGCAAG
TTTTGTAGATTAAGAACTCAAAATAACTCACAAAATATCAAAAAGTATGG
TTACTAAATTTGGAACCCTTTAGTATTCATATATTGACATCTCAAGTCTA
AGTTAGGTCTTGAGGATGATGCCCTAATGATGATAACTGTACCATTCTGT
ACCTATATAGCCTGTCAAATCCTTAGGTATCTTTAATGATAATTCTTGTG
ATTGTTCCTGAGCAATCTGTGTCAGCTTTTCCTGTATAGTTGCTCAGCAA
TCTCTAAATAAATGAACAGGCTAGAATTGTATGGAGAATTTTGAAACTAT
AACATAACATTGAGAATATTCCTGGCTCT

Query= MSMg01no424_o06.g1 MSMg01no424_o06.g1 CHROMAT_FILE:
MSMg01no424_o06.g1 PHD_FILE: MSMg01no424_o06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:57 2005
         (556 letters)



>mm_chr1_116925895_116926850
          Length = 956

 Score = 1075 bits (556), Expect = 0.0
 Identities = 556/556 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcagcctaaattaatgtgaaatcaaactagaataaatcactaagttgggcacacaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tttcagcctaaattaatgtgaaatcaaactagaataaatcactaagttgggcacacaatg 697

                                                                       
Query: 61  gatttcattcttaacctggagaatgctctaaaactaggaagtagattgactgtgtggaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gatttcattcttaacctggagaatgctctaaaactaggaagtagattgactgtgtggaaa 637

                                                                       
Query: 121 tgacctccttcccaaatagatgaatttactaatatgaaatctacacaatgtgtgactcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgacctccttcccaaatagatgaatttactaatatgaaatctacacaatgtgtgactcat 577

                                                                       
Query: 181 ccagatactgaagacagaattatttcagcttctgccccacctactattttcacctaaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ccagatactgaagacagaattatttcagcttctgccccacctactattttcacctaaaag 517

                                                                       
Query: 241 ttctttttgccttcttgtacaaatataagtcttagggaagcaccctcctagaccttcttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttctttttgccttcttgtacaaatataagtcttagggaagcaccctcctagaccttcttt 457

                                                                       
Query: 301 atttctgacctcagcaagttttgtagattaagaactcaaaataactcacaaaatatcaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atttctgacctcagcaagttttgtagattaagaactcaaaataactcacaaaatatcaaa 397

                                                                       
Query: 361 aagtatggttactaaatttggaaccctttagtattcatatattgacatctcaagtctaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aagtatggttactaaatttggaaccctttagtattcatatattgacatctcaagtctaag 337

                                                                       
Query: 421 ttaggtcttgaggatgatgccctaatgatgataactgtaccattctgtacctatatagcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttaggtcttgaggatgatgccctaatgatgataactgtaccattctgtacctatatagcc 277

                                                                       
Query: 481 tgtcaaatccttaggtatctttaatgataattcttgtgattgttcctgagcaatctgtgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgtcaaatccttaggtatctttaatgataattcttgtgattgttcctgagcaatctgtgt 217

                           
Query: 541 cagcttttcctgtata 556
           ||||||||||||||||
Sbjct: 216 cagcttttcctgtata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)