XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAAC
TGATTACACTTGAAGCACCTAAAGAAATGTTCAACATCCTTAGTCATCAG
GGGAATACAAATAAAAACAACCCGGAGATTTCACCTCACACAAGTCAGAA
TGGCTAAGATGAAAACTTAGGTGACAGCATATGCTGGTGAAGATGTGGAG
AGAGGAACACTCCCCAATTACTGGTGGGATTGCAAGCTGGTGTAACCACA
TTATAAATCAGTCTGGCGGTTAGTCAGAAAATTAGACCTATTACTACCTG
AGGACCTACCTATACCACTCCTGGGCATATACCCAGAAGAAGCTCCAACA
TGTAATAAGGACATATGTTCCACTATGTTCATAGCAGCCATATTTATAGT
AGTCAGAGGCTGGAAACAACCCAAACGGGCACATAATTTTAAAAACACTG
TTTCTCTTTTATAGTTCTTCAGACAGGTCATGTGTAATATACAAAGTCCA
CTAAGCTAAAAGGCTTAGTTTATATTGATATAAGTCCCTGAGATCTTTTA
TTTATGACAATTGCTCACCTCTGAGAGATTCAGTGCATTGTTTGTTGGAG
CAGGAATGAGATGGAAACTCGGGAGACACCTGCAAAATATAAAGCAGTTC
TTATATTATTGTTATAGTTTCACTGAAATAGATAGTCTTCAACTATTGAC
TTTCGATGTAAGACCATGGAAAACTTTGGGGGGGAAGAATTGTTTCCCTG
CAAAGGAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTTGGTTTCTCCATCTATGGTAATTGAGAATTTTGCTG
GCATTTGTGTTCTCTTAGGGTCTGTATAACATCTGTACAGGATCTTCTGT
CTTTCATAGTCTCTGGTGAGAACTCTGGTGTAATTCTAATAGGTCTGCCT
TTATGTTACTTGACCTTTTTCCCTTACTGCTTTTAATATTATATCTTTAT
TTAGTACATTTGTTGTTCTGATTATTATGTGTCAGGAGGAATTTCTTTTC
TGGTTTAATCTATTTGGAGTTCTGTAGGCTTCTTGTATGTTCATGGGCAA
TTCTTTCTCTAGGTATGTGAAGTTTTCTTCTATAATTTTGTCGAAGATAT
TTACTGGCCTTTTAAGTTGAATATCTTCATTCTCATCTATACCTATTATC
TGTAGGTTTGGTCTTCTCATTGTGTCCTGAATTTCCTGGATGTTTTGAGT
TAGGATCTTTTTGCTTTTTGCATTTTCTTTGATTGTTGTGTCCATGTTTT
CTATGGAATCTTCTGTACCTGAAGTTCTCTCTTCCATCTCTTGGATTTTG
GTGCTGATGCTCCCATCTTGGTTCCTGATTTCCTTTTCAAGGTTTTATCT
CCCCAGATGGCCAACTTTGGGGTTCCTTAAATGGGTCCCCCTCCCCTTTT
TTGACCGGAAGGGATTGTTTCATTCCACCCCCAATTTGGTGTGGTTTTCC
GCAATTCTG

Query= MSMg01no425_e15.b1 MSMg01no425_e15.b1 CHROMAT_FILE:
MSMg01no425_e15.b1 PHD_FILE: MSMg01no425_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:28 2005
         (574 letters)



>mm_chr1_19376946_19377919
          Length = 974

 Score = 1009 bits (522), Expect = 0.0
 Identities = 558/570 (97%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaactgattacacttgaagcacctaaagaaatgttcaacatccttagtcatca 64
           ||||| ||||||||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattatcaactgaggaaacttgaagcacctaaagaaatgttcaacatccttagtcatca 264

                                                                       
Query: 65  ggggaatacaaataaaaacaacccggagatttcacctcacacaagtcagaatggctaaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggggaatacaaataaaaacaacccggagatttcacctcacacaagtcagaatggctaaga 324

                                                                       
Query: 125 tgaaaacttaggtgacagcatatgctggtgaagatgtggagagaggaacactccccaatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaaaacttaggtgacagcatatgctggtgaagatgtggagagaggaacactccccaatt 384

                                                                       
Query: 185 actggtgggattgcaagctggtgtaaccacattataaatcagtctggcggttagtcagaa 244
           |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 actggtgggatttcaagctggtgtaaccacactataaatcagtctggcggttagtcagaa 444

                                                                       
Query: 245 aattagacctattactacctgaggacctacctataccactcctgggcatatacccagaag 304
           ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 aattaaacctattactacctgaggacccacctataccactcctgggcatatacccagaag 504

                                                                       
Query: 305 aagctccaacatgtaataaggacatatgttccactatgttcatagcagccatatttatag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagctccaacatgtaataaggacatatgttccactatgttcatagcagccatatttatag 564

                                                                       
Query: 365 tagtcagaggctggaaacaacccaaacgggcacataattttaaaaacactgtttctcttt 424
           |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||
Sbjct: 565 tagtcagaggctggaaacaacccaaatgggcacataattttaaaaacaccatttctcttt 624

                                                                       
Query: 425 tatagttcttcagacaggtcatgtgtaatatacaaagtccactaagctaaaaggcttagt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatagttcttcagacaggtcatgtgtaatatacaaagtccactaagctaaaaggcttagt 684

                                                                       
Query: 485 ttatattgatataagtccctgagatcttttatttatgacaattgctcacctctgagagat 544
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 685 ttatattgatataagtccctgagatcttttatttatgaaaattgctcacctctgagagat 744

                                         
Query: 545 tcagtgcattgtttgttggagcaggaatga 574
           ||||||||||||||||||||||||||||||
Sbjct: 745 tcagtgcattgtttgttggagcaggaatga 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)