Query= MSMg01no425_i14.b1 MSMg01no425_i14.b1 CHROMAT_FILE:
MSMg01no425_i14.b1 PHD_FILE: MSMg01no425_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:47 2005
(616 letters)
>mm_chr1_69527868_69528883
Length = 1016
Score = 1044 bits (540), Expect = 0.0
Identities = 586/614 (95%), Gaps = 24/614 (3%)
Strand = Plus / Plus
Query: 4 tttttaatagggttatttgattttctggagtccaccttcttgagttctttatatacattg 63
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 224 tttttaatagggttatttgattttctgga--------------------tatatacatta 263
Query: 64 gatattagtcccctatctgatttaggataggtaaagatcctttcccaatctgttggaggt 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 gatattagtcccctatctgatttaggataggtaaagatcctttcccaatctgttggtggt 323
Query: 124 ccttttgtctactccctgtct-cctgaatttttattctgctacagccactccgatttctt 182
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccttttgtctactccctgt-tacctgaatttttattctgctacagccactccgatttctt 382
Query: 183 tgttggttcttgtaccatctggtctttactattccctttgcacaagcatcacatacttct 242
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgttggttcttgtaccatctggtttttactattccctttgcacaagcatcacatacttct 442
Query: 243 tcccttctcttcccttaactctcttttggaataagtcttccttccttgtctaccacgtgg 302
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcccttc-cttcccttaactctcttttggaataagtcttccttccttgtctaccacgtgg 501
Query: 303 ggacaggatctacctcccttctcatggtgcactctgtttgcaaatcacttcagtcatctt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggacaggatctacctcccttctcatggtgcactctgtttgcaaatcacttcagtcatctt 561
Query: 363 ccttgccctcatcatgatttgctctattatctatttagtctttgatctcaaggaagaaag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccttgccctcatcatgatttgctctattatctatttagtctttgatctcaaggaagaaag 621
Query: 423 ggcatttt-ccttcactctcctagaggtctagaatggtggttgaaactgatgagagatca 481
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 622 ggcatttttccttcactctcctagaggtctagaatggtggctgaaactgatgagagatca 681
Query: 482 gtaaacaccaaataaaggaaggaaatgattgggatttgaccagggatgttcttgtcttgt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtaaacaccaaataaaggaaggaaatgattgggatttgaccagggatgttcttgtcttgt 741
Query: 542 ccatcttcgtttgtgtatctagatttcccattatcaatggattcacatttgtttagggat 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ccatcttcgtttgtgtatctagatttcccattatcaatggattcacatttgtttagggat 801
Query: 602 tcatgaacatttca 615
||||||||||||||
Sbjct: 802 tcatgaacatttca 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_i14.g1 MSMg01no425_i14.g1 CHROMAT_FILE:
MSMg01no425_i14.g1 PHD_FILE: MSMg01no425_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:47 2005
(544 letters)
>mm_chr1_69718447_69719390
Length = 944
Score = 1013 bits (524), Expect = 0.0
Identities = 539/544 (99%)
Strand = Plus / Minus
Query: 1 tcttgcaatggtaaactttcacaaagtatgtgaaaactgtagttgactctgcttttatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcttgcaatggtaaactttcacaaagtatgtgaaaactgtagttgactctgcttttatag 685
Query: 61 actgagacctagaaaaagaatactggcatttgttgtgaatctaaattctcaaaagtgtga 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acggagacctagaaaaagaatactggcatttgttgtgaatctaaattctcaaaagtgtga 625
Query: 121 tctctactctgttcatctgtctcagatctgggactcaatgactgtacaggttcgggatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tctctactctgttcatctgtctcagatctgggactcaatgactgtacaggttcgggatcc 565
Query: 181 ggggaacacagcaaattaagaagtagatgcccgtgcatctcagtcatgtgaaaccacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggggaacacagcaaattaagaagtagatgcccgtgcatctcagtcatgtgaaaccacagg 505
Query: 241 ttatttttgcacgagtgaccacagtgaagctaattctgttcgtgttttaatgaacttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 504 ttatttttgcacgagtgaccacagtgaagctaattctgttcgtgttttaatgaacttcag 445
Query: 301 tggttttagtgtgagtaaaaatcaacaaatcaaatcccattagttaattagacaacaaat 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 tggttttagtgtgagtaaaaatcaagaaatcaaatcccattagttaattagacaacaaat 385
Query: 361 cacattccattttacacaagataaagctcgttatattttaagacatagatatgaacatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cacattccattttacacaagataaagctcgttatattttaagacatagatatgaacatgt 325
Query: 421 gcataaaactataaccaagataaaactttgtgctttgtatgcggttttacaatttgtaag 480
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 324 gcataaaactacaaccaagataaaactttgtgttttgtatgcggttttacaatttgtaag 265
Query: 481 tgcaggcagatcttttgtttgtttttaattctaaagcagtttatattctttggatatctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgcaggcagatcttttgtttgtttttaattctaaagcagtttatattctttggatatctt 205
Query: 541 ataa 544
||||
Sbjct: 204 ataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
