Query= MSMg01no426_h18.b1 MSMg01no426_h18.b1 CHROMAT_FILE:
MSMg01no426_h18.b1 PHD_FILE: MSMg01no426_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:02 2005
(318 letters)
>mm_chr1_180001952_180002669
Length = 718
Score = 534 bits (276), Expect = e-156
Identities = 305/318 (95%), Gaps = 6/318 (1%)
Strand = Plus / Minus
Query: 5 gaattcagaaatcttcctgcctctgcctcccaagtgctgggattaaaagcatgggccacc 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaattcagaaatccgcctgcctctgcctcccaagtgctgggattaaaagcatgggccacc 496
Query: 65 actgcctggcttgtggtggttcttaaatatgggaatgaaggctttctttatgaaaatttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 actgcctggcttgtggtggttcttaaatatgggaatgaaggctttctttatgaaaatttt 436
Query: 125 ggtaaacgttcctaagtactgtgatgatgttttgtatcttctattttgatgatattctag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggtaaacgttcctaagtactgtgatgatgttttgtatcttctattttgatgatattctag 376
Query: 185 gtaatactacagattcctgggatgggtaatattaacatatcatagtatattattggttta 244
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 375 gtaatactacagattcctgggatgtgtaatattaacatatcatagcatattattggttta 316
Query: 245 aatcttctagacatttaaatttttatttattactgtgcatgtgtgtg------tgtgtgt 298
|||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 315 aatcttttagacatttaaatttgtatttattactgtgcgtgtgtgtgcgcgcgtgtgtgt 256
Query: 299 gtgtgtgtgtgtgtgtgt 316
||||||||||||||||||
Sbjct: 255 gtgtgtgtgtgtgtgtgt 238
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_h18.g1 MSMg01no426_h18.g1 CHROMAT_FILE:
MSMg01no426_h18.g1 PHD_FILE: MSMg01no426_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:02 2005
(438 letters)
>mm_chr1_179660258_179661096
Length = 839
Score = 803 bits (415), Expect = 0.0
Identities = 433/439 (98%), Gaps = 2/439 (0%)
Strand = Plus / Plus
Query: 1 ttccccccaactcgactcaggtgttaggtatgtgtatatatctgcctgcaggtatgtgca 60
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
Sbjct: 202 ttccccccaactcgactcaggtgttaggtatgtgtatatatctgcgtgcgggtatgtgta 261
Query: 61 catgagacctgctgccatgcttcctgccatgaaagctagcaaatcccctggagttggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 catgagacctgctgccatgcttcctgccatgaaagctagcaaatcccctggagttggagg 321
Query: 121 ttcaggaagttttagctgcctgagtactgggaactgaacttcggtcctctgaaaaaacag 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 322 ttcaggaagttttagctgcctgagtactgggaactgaacttcg-tcctctgaaaaaacag 380
Query: 181 caagctcttgaaaccgttaagctatgtctctgcccctaaaaattattttagaatgtgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagctcttgaaaccgttaagctatgtctctgcccctaaaaattattttagaatgtgaac 440
Query: 241 agtggtctacttgggatgttttgaatattttttt-ctcagtattttataaaagtttggta 299
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 agtggtctacttgggatgttttgaatattttttttctcagtattttataaaagtttggta 500
Query: 300 tacccagctgcagagcaaccctgcagccacggggctaagcaggtctaacacccctatgcc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacccagctgcagagcaaccctgcagccacggggctaagcaggtctaacacccctatgct 560
Query: 360 gtctctatgttgtcatgtgactatgttaccctgaatgtcctgaatacagacacagctctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtctctatgttgtcatgtgactatgttaccctgaatgtcctgaatacagacacagctctt 620
Query: 420 ccaaggagaaagggcttta 438
|||||||||||||||||||
Sbjct: 621 ccaaggagaaagggcttta 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 839
Length adjustment: 9
Effective length of query: 429
Effective length of database: 830
Effective search space: 356070
Effective search space used: 356070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
