TTTTCTCTCTTTTTTTATTTTTAGTGGTTTTTANNNNNNNCTTCTATAAT
TTGGGCGCTATAGACTCACTATTTCCAAGAGGATCCGCGGAATTCTTCAN
TTTTTCAGCACAATTTTTTTCCAAGGCTTAAAGCTTCTAGTCCTCCTTAA
ATGACTTAAAGGGAAATTTTCTTTTCTACCTTCAATTTCCAGCCTGGCTT
ACCTTCTAAACATAGGTATTGTAAGAGCATAGGATTATTTGAAATTCCTA
ATTTTCTCAAACCCTTTAATTTTAAAATGGCCCTTTTTAATCCAAAAAAG
GGAACGGGGGGTGCAAAAAAAAGCCCCTTCGGGTTTTAAAAAAAAAAATG
GGGGGTTAAATGTTTTAAAAGGGGAACCCCCCCCCCCCCGGGGGGTGGGG
GCCCCCTATCTTCTTTGGAGAAGGGAGTAAAAAAAGGGCCCCTCCCTATT
TTTGTTTTTTTTCGGGGCCGTCCCCCTCCCAAAAAGAGAGGGACATNAAA
AATATTATTTTTTTTTTTTCCGGNGGAGTGTTTGCGCCCCACCCCCCCCC
CCCCATTATAAAATTTTTGCGGTGTTCGTTTCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXGATCAGAAATCCTGATTCTATGGGTA
CTGGAAAAATAACTTGCAGAGCAAACCTTATTACATGGATCAATGACTAA
AGCACTTCTCTGGAGCTGATAAAAGCTAACTCTGCTGTAGTGATCGGTAG
TAATGTTCAGGGGAGAGTACGGAGAAGGCAAACTCTTCCTATATGTCTCG
GGATTTTGGAGGACATCACAAGATGACAGCTGATAACTACAGTAGCAATG
CTGATCTACGTGAATATCATATTATGCCAGTAGCTATGAACTCAGGTAAG
AAAGCAAGTGCAAGCTGGAGAGTTGGCTCAGTGGTTAGGAGCACTGACTG
CTCTTCTAGAAGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCAC
AACCATCTGTAATGGGATCCGATGCCCTCTTCTGGTGTATCTGAAGACAG
CAACAGTGTACTCACATACATAAATAAATAAATCATATATATATGAGTTT
ACTACCCCTTTAAGAGAGAGAGAGAGAGAGCTAGCTAGCATGTGCAAGAT
GCCCTTAAAATTGGGACTCCCGTTCTTAGGGAACCTGACTCCCTCTTTCT
GGCCTCCATTCCCTGGTTGGGATACTCCCTAAACTCCCTTAAACTCATTA
ATGGACACCCCCTCCTTACCCCACTCTCTTCAATGTTGCTTATTTAACTC
CTTCCTACACCCTATTCCCTCTCCCCCCCCTTTTGGTATCTTAGTTTTTC
ACTGN

Query= MSMg01no426_n11.g1 MSMg01no426_n11.g1 CHROMAT_FILE:
MSMg01no426_n11.g1 PHD_FILE: MSMg01no426_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:31 2005
         (507 letters)



>mm_chr1_159383922_159384828
          Length = 907

 Score =  878 bits (454), Expect = 0.0
 Identities = 494/508 (97%), Gaps = 4/508 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatcagaaatcctgattctatgggtactggaaaaataacttgcagagcaaaccttattac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 gatcagaaatcctgattctatgggtactggaaaaataacttgcagagcaaaccttattat 260

                                                                       
Query: 61  atggatcaatgactaaagcacttctctggagctgataaaagctaactctgctgtagtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggatcaatgactaaagcacttctctggagctgataaaagctaactctgctgtagtgat 320

                                                                       
Query: 121 cggtagtaatgttcaggggagagtacggagaaggcaaactcttcctatatgtctcgggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 321 cggtagtaatgttcaggggagagtacggagaaggcaaactcttcctatacgtcttgggat 380

                                                                       
Query: 181 tttggaggacatcacaagatgacagctgataactacagtagcaatgctgatctacgtgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttggaggacatcacaagatgacagctgataactacagtagcaatgctgatctacgtgaa 440

                                                                       
Query: 241 tatcatattatgccagtagctatgaactcaggtaagaaagcaagtgcaagctggagagtt 300
           ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tatcaaattatgccagtagctatgaactcaggtaagaaagcatgtgcaagctggagagtt 500

                                                                       
Query: 301 ggctcagtggttaggagcactgactgctcttctagaagtcctgagttcaattcccagcaa 360
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 ggctcagtggttaggagcactgactgctcttctagaggtcctgagttcaattcccagcaa 560

                                                                       
Query: 361 ccacatggtggctcacaaccatctgtaatgggatccgatgccctcttctggtgtatctga 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 ccacatggtggctcacaaccatctgtaatgggatccaatgccctcttctggtgtatctga 620

                                                                       
Query: 421 agacagcaacagtgtactcacatacataaa-taaataaatcatatatatatgagtttact 479
           ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 621 agacagcaacagtgttctcacatacataaaataaataaatcatatatatatgggtttact 680

                                       
Query: 480 accccttta-agagagagagagagagag 506
           ||||  ||| ||||||||| ||||||||
Sbjct: 681 accc--ttagagagagagacagagagag 706


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)