Query= MSMg01no426_o13.b1 MSMg01no426_o13.b1 CHROMAT_FILE:
MSMg01no426_o13.b1 PHD_FILE: MSMg01no426_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:37 2005
(407 letters)
>mm_chr1_159523417_159524223
Length = 807
Score = 735 bits (380), Expect = 0.0
Identities = 400/407 (98%)
Strand = Plus / Plus
Query: 1 gccatgcagataatgctgctganatcttcatggttttctccacggaagactttttttttt 60
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 201 gccatgcagataatgctgctgaaatcttcatggttttctccacagaagactttttttttc 260
Query: 61 cccatggagcagcaggatctaacggaagatgctccagccagctctcagccagttctgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccatggagcagcaggatctaacggaagatgctccagccagctctcagccagttctgcat 320
Query: 121 ggtgagctttggcatgcaaagttgctagctgtgtgattcctctcccctttaagcttcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgagctttggcatgcaaagttgctagctgtgtgattcctctcccctttaagcttcagt 380
Query: 181 tttcccatctgtaaaatgaaaattaaaaacaataattcatctttccaccataagggatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcccatctgtaaaatgaaaattaaaaacaataattcatctttccaccataagggatca 440
Query: 241 tcctgtgttatgttataaagccctttatgagaacttcttttaaagactctgcgtgcatgg 300
||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctgggggaggttataaagccctttatgagaacttcttttaaagactctgcgtgcatgg 500
Query: 301 ctaagggttggtgttttatttgagtattgcatggtgatagtcaaacttttgctaaggaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaagggttggtgttttatttgagtattgcatggtgatagtcaaacttttgctaaggaca 560
Query: 361 tccaaaatattgtttgaaaagcattctctgtaaataccctcttaagt 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccaaaatattgtttgaaaagcattctctgtaaataccctcttaagt 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_o13.g1 MSMg01no426_o13.g1 CHROMAT_FILE:
MSMg01no426_o13.g1 PHD_FILE: MSMg01no426_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:37 2005
(531 letters)
>mm_chr1_159701885_159702814
Length = 930
Score = 698 bits (361), Expect = 0.0
Identities = 370/373 (99%), Gaps = 1/373 (0%)
Strand = Plus / Minus
Query: 159 aactataggccaacatcactgatgagaaacacaaagaaatgctatttaccccagacagga 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 aactataggccaacatcactgatgagaaacacaaagaaatgctatttaccccagacagga 871
Query: 219 aactaacaaaacaaattatttcatccaaatccagattggtgtaccaatgaatttattagc 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 aactaacaaaacaaattatttcatccaaatccagattggtgtaccaatgaatttattagc 811
Query: 279 tatttacaggatcaagggagactcaaacacagctgcctcactaaaaaccaaaaactgtga 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tatttacaggatcaagggagactcaaacacagctgcctcactaaaaaccaaaaactgtga 751
Query: 339 tgacgccttaagaaagctgtgttagtgcagctcaacctcccgcagtgttctgtgccttgt 398
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgacgccttaagaaagctgcgttagtgcagctcaacctcccgcagtgttctgtgccttgt 691
Query: 399 gtgcgcaaccagcccttgagaccatgtcagtgggagcagaactctgcacagttgatgaag 458
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gtgcgcaaccagcccctgagaccatgtcagtgggagcagaactctgcacagttgatgaag 631
Query: 459 aatctcaaaggagagtcagaggactcccccatcctgtgaggggctgtataaaaagcctgg 518
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 630 aatctcaaaggagagtcagaggactcccccatcctgtgaggggctgta-aaaaagcctgg 572
Query: 519 tatttgagtgtcc 531
|||||||||||||
Sbjct: 571 tatttgagtgtcc 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space: 479320
Effective search space used: 479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
