ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGATCCGCGGAAT
TCTGTGGGATTGCTAGATCTTAGTGAGAACACCAAAGATGATCCTGTTAA
GCCCAAAGTTTATTTCTTTTTTTTCCCTTTGTTTGTTTCCCAACATTTAT
TCGTCATCTGCTTTATAAGAGAAAAAAAGTAAAAAAAAAATTAAATTAAA
AAAAATATGTTCAAATTTCTGCAACATCTTCAAGCTATGTCTCCATCTCT
ACTGCCACCAATGTATTGCAGGCTACTGTTGCCTCTCCCCTAGAGAATTG
TATGTTGCTGTTGTTGTTTCTGCTGCTGCTGCTGCTGTTCATTTGTTTTG
TTTTGTTTTGGGTTTTTTGTTTGTTTTGTTTTGCTTTGTTTTTGTTTGTT
TGTCAGTTCTCTGCATACCTACTGATCTTTTTAGAGTAAAATAAGGTGAC
AATTCCTTCCTTAAAATTCTTCCACCTGAGCCTGGATACCATCTTGAGTT
TCACCCATAACAAATTCACTGGCTATTTAACCGTTCCTATTTTCTCCACA
CAATATTTTTTTACCCTACCTGTTTCATCCTCCCTTTCTCATTGTACTAC
CTTCTTCCCATTGCCCCTCAACCCGAAAAAACTACTCCTTAATTTACCCC
AAGTTACATTTTTTTTTATTACCACATCGTTTAGTTTAATCATAATAACA
AAACACGAAACTTATCTCATCCATATATACTTTTCCCCGCTCCTCCCATC
ATTCCCATTTTATTTTTCTCCTCCTCCC

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAAGAGAGGCCTGATTATCCAGGATGACA
CACACAGACAGCAGGGAGAATGGGGATAAAGGAGGGAGTTAGGGCAAGAG
GCAGATTTGTAAAGAGCCTGGCTAAAATGTCCAGAAAACCATCGAAAAGC
AGACAGCCACACTTTGAGAATATCTATGATACCCTTTGAACTTCTTCAGT
TAAATGGGAGCTATCACTGGGCACTGACCTGATCACATCTCTTCTGAAAA
CTGATGGCAAGAGCTCAAGTTTTGTTAGGAGAAATATATGCCTCTCTGTC
TCTGTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG
CCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGTCTATCTC
TCTGTCTCTGTCTGCCTCTGCTTCTGTCTCTGTCTCTCTGTCTCTCTCTG
TGTCTCTGTCTCTCTCTCTGTGTCTCTGAGTGTCTCTGCCTCTTTCTCTC
ATTTCTTTCTTTCTCCCTTCCCACCCGAGACAGGGTTTTTTGTTTTGCTT
TTTTGTCTGTTTGCTTTTGGCTTTTGTTTTTTCGGCCCCTACTTTTCCCC
TTTCCTTTCTTTTTTTTCCCTCCTTTCTCTCCCGCTCCTTTTTTTTTTTT
ACCTTCCGCCCCCTCTTACTTTTTTCTTTCTACCCCCCCTTTTCTCTTTT
TTCCTCTTCCTTTTTCTG

Query= MSMg01no428_o20.b1 MSMg01no428_o20.b1 CHROMAT_FILE:
MSMg01no428_o20.b1 PHD_FILE: MSMg01no428_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:15 2005
         (344 letters)



>mm_chr1_170567079_170567822
          Length = 744

 Score =  574 bits (297), Expect = e-168
 Identities = 300/301 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagtgagaacaccaaagatgatcctgttaagcccaaagtttatttcttttttttcccttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtgagaacaccaaagatgatcctgttaagcccaaagtttatttcttttttttcccttt 242

                                                                       
Query: 61  gtttgtttcccaacatttattcgtcatctgctttataagagaaaaaaagtaaaaaaaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttgtttcccaacatttattcgtcatctgctttataagagaaaaaaagtaaaaaaaaaa 182

                                                                       
Query: 121 ttaaattaaaaaaaatatgttcaaatttctgcaacatcttcaagctatgtctccatctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaaattaaaaaaaatatgttcaaatttctgcaacatcttcaagctatgtctccatctct 122

                                                                       
Query: 181 actgccaccaatgtattgcaggctactgttgcctctcccctagagaattgtatgttgctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actgccaccaatgtattgcaggctactgttgcctctcccctagagaattgtatgttgctg 62

                                                                       
Query: 241 ttgttgtttctgctgctgctgctgctgttcatttgttttgttttgttttgggttttttgt 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgttgttgctgctgctgctgctgctgttcatttgttttgttttgttttgggttttttgt 2

            
Query: 301 t 301
           |
Sbjct: 1   t 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space:   246225
Effective search space used:   246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no428_o20.g1 MSMg01no428_o20.g1 CHROMAT_FILE:
MSMg01no428_o20.g1 PHD_FILE: MSMg01no428_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:15 2005
         (527 letters)



>mm_chr1_170377882_170378808
          Length = 927

 Score = 1000 bits (517), Expect = 0.0
 Identities = 523/525 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagaggcctgattatccaggatgacacacacagacagcagggagaatggggataaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagagaggcctgattatccaggatgacacacacagacagcagggagaatggggataaagg 260

                                                                       
Query: 61  agggagttagggcaagaggcagatttgtaaagagcctggctaaaatgtccagaaaaccat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggagttagggcaagaggcagatttgtaaagagcctggctaaaatgtccagaaaaccat 320

                                                                       
Query: 121 cgaaaagcagacagccacactttgagaatatctatgataccctttgaacttcttcagtta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgaaaagcagacagccacactttgagaatatctatgataccctttgaacttcttcagtta 380

                                                                       
Query: 181 aatgggagctatcactgggcactgacctgatcacatctcttctgaaaactgatggcaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgggagctatcactgggcactgacctgatcacatctcttctgaaaactgatggcaaga 440

                                                                       
Query: 241 gctcaagttttgttaggagaaatatatgcctctctgtctctgtctgcctctgcctctgcc 300
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcaagttcagttaggagaaatatatgcctctctgtctctgtctgcctctgcctctgcc 500

                                                                       
Query: 301 tctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcc 560

                                                                       
Query: 361 tctgcctctgtctatctctctgtctctgtctgcctctgcttctgtctctgtctctctgtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgcctctgtctatctctctgtctctgtctgcctctgcttctgtctctgtctctctgtc 620

                                                                       
Query: 421 tctctctgtgtctctgtctctctctctgtgtctctgagtgtctctgcctctttctctcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctctctgtgtctctgtctctctctctgtgtctctgagtgtctctgcctctttctctcat 680

                                                        
Query: 481 ttctttctttctcccttcccacccgagacagggttttttgttttg 525
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctttctttctcccttcccacccgagacagggttttttgttttg 725


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space:   474089
Effective search space used:   474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)