Query= MSMg01no429_b10.b1 MSMg01no429_b10.b1 CHROMAT_FILE:
MSMg01no429_b10.b1 PHD_FILE: MSMg01no429_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:27 2005
(521 letters)
>mm_chr1_121976223_121977143
Length = 921
Score = 586 bits (303), Expect = e-171
Identities = 336/347 (96%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 2 tcttcttatatcactctcagccctcaacttaaaaaaaaatattttaaactaaactataaa 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 350 tcttcttatatcactctcagccctcaacttaaaaaaaaatattttaaactaaactacaaa 291
Query: 62 agagtcactagccacttttcttcccctctaatccctctcacctatcctaccgactcttct 121
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 290 agagtcactagccatttttcttcccctctaatccctctcagctatcctaccgactcttct 231
Query: 122 ccactgaccgcgtctctctgtactgttgcatacacacgtatgcctcagcattcaaacccg 181
|||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
Sbjct: 230 ccactgaccgcgtctctctgtactgttgcatacatacgtatgcctcagcatacaaacc-g 172
Query: 182 ccctgttcagtctcggctcagtgttaatgctgtgtacaccaccccggggctggctatcag 241
|||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||
Sbjct: 171 ccctgttcagtctcggctcagtgttactgctgtgtacaccacctcagggctggctatcag 112
Query: 242 atttggtactagataagcagttaggggtctcatcccagggcagactgtttctcctggtct 301
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 111 atttggtactagataagcagttaggggtctcatcccagggaagactgtttctcctggtct 52
Query: 302 cagcaagccttggttgcctgtacctctttgt-tatgctgggaccaca 347
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 51 cagcaagccttggttgcctgtacctctttgtctatgctgggaccaca 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_b10.g1 MSMg01no429_b10.g1 CHROMAT_FILE:
MSMg01no429_b10.g1 PHD_FILE: MSMg01no429_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:28 2005
(381 letters)
>mm_chr1_121808402_121809176
Length = 775
Score = 656 bits (339), Expect = 0.0
Identities = 369/381 (96%), Gaps = 6/381 (1%)
Strand = Plus / Plus
Query: 1 actggattcagtcagtctaagaaaaaaaaaaattcatacttacttgagagcccataccac 60
||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||
Sbjct: 201 actggattcagtcagtctaagaaaaaaaaaa--tcatactt-c---agagcccataccac 254
Query: 61 aacagtttatttccggctgtgaaaagggatgcagctggacaggtttattggccaaaacca 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aacagtttatttccagctgtgaaaagggatgcagctggacaggtttattggccaaaacca 314
Query: 121 caagtggcagtgtcacatgctgactagtgtccctacttccaccaagctcccatggttgag 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 315 caagtggcagtgtcacatgctgcctagtgtccctacttccaccaagctcccatggttgag 374
Query: 181 ccacatttccattatcttacgaggtggctgtatttggagcttcggtctatcattgaaata 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 375 ccacatttccattatcttacgaggtggctgtatttggagcttcggcctatcattgaaata 434
Query: 241 gaaacggaaggttcgtgggatggcaatactcagatctcactgctttcgagctcagatccg 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaaacggaaggttcgtgggatagcaatactcagatctcactgctttcgagctcagatccg 494
Query: 301 gacacatacagaaaaaataccacatgaagatccaggggaaagatggccatttgttagcct 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 495 gacacatacagaaaaaataccacatgaagatccaggggtaagatggccatttgttagcct 554
Query: 361 tgctgaaatgcccagggagcc 381
||||||||| |||||||||||
Sbjct: 555 tgctgaaatacccagggagcc 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 775
Length adjustment: 9
Effective length of query: 372
Effective length of database: 766
Effective search space: 284952
Effective search space used: 284952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|