Query= MSMg01no429_e05.b1 MSMg01no429_e05.b1 CHROMAT_FILE:
MSMg01no429_e05.b1 PHD_FILE: MSMg01no429_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:41 2005
(327 letters)
>mm_chr1_76345418_76346144
Length = 727
Score = 588 bits (304), Expect = e-172
Identities = 317/322 (98%), Gaps = 2/322 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtgtttatttactatggtctgattatgacatataaggagcttcaaggagaagc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaattcagtgttaatttactatggtctgattatgacatataaggagcttcaaggagaagc 323
Query: 65 tatatgtgacagagattatttttctaatgtattttcttggatttggcagatttcttttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatatgtgacagagattatttttctaatgtattttcttggatttggcagatttcttttta 263
Query: 125 tttccaaaaaattgttttttagtatgtatctagtactcctctttgtacaaagataaggta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tttccaaaaaattgttttttagtatgtatctagtactcctctttgtacaaagataaggta 203
Query: 185 tgatagtttgaatgaggatggatatgcccctatgggcttatatattttgatacttgatcc 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgatagtttgaatggggatggatatgcccctatgggcttatatattttgatacttgatcc 143
Query: 245 ctagttggtaactattttaggaaaatttaagaggtgtgccctgcatggtatgcctcgatg 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142 ctagttggtaactattttaggaaaatttaagaggtgtgccctccatggtatgcctcgatg 83
Query: 305 gtattggggggggtggggatta 326
|||| ||||||||||||||||
Sbjct: 82 gtat--gggggggtggggatta 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_e05.g1 MSMg01no429_e05.g1 CHROMAT_FILE:
MSMg01no429_e05.g1 PHD_FILE: MSMg01no429_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:41 2005
(517 letters)
>mm_chr1_76189298_76190214
Length = 917
Score = 1000 bits (517), Expect = 0.0
Identities = 517/517 (100%)
Strand = Plus / Plus
Query: 1 agttgacctttgacattggcatgtccctgcagattttggatgaagtgattgttaagactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttgacctttgacattggcatgtccctgcagattttggatgaagtgattgttaagactt 260
Query: 61 cgatgctaacaaggcccacatgtatctaccaaccctgcttaaaaagtggtgtacctccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgatgctaacaaggcccacatgtatctaccaaccctgcttaaaaagtggtgtacctccaa 320
Query: 121 tgagttatcgttgcaatgaggaaagactcttggcatcagctgcaatcacattctgtagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagttatcgttgcaatgaggaaagactcttggcatcagctgcaatcacattctgtagtg 380
Query: 181 atgaagtctttttagacactgggatctggccatagcctgtggtgttaggctgattcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaagtctttttagacactgggatctggccatagcctgtggtgttaggctgattcaaag 440
Query: 241 agaaacaaggccttgctgatctttccgacatcatcctccaactatagttgaagttgctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaacaaggccttgctgatctttccgacatcatcctccaactatagttgaagttgctgt 500
Query: 301 ctttggcttttcctaagcaagacaaacagaaagaggccacagtgttggttggactatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttggcttttcctaagcaagacaaacagaaagaggccacagtgttggttggactatggt 560
Query: 361 tcattgtgtggcttctctaagctgcggtttccactactggagtgaggactcttttgtggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcattgtgtggcttctctaagctgcggtttccactactggagtgaggactcttttgtggt 620
Query: 421 ttggtagctcagtgagcacatcaggtctgatcctcctgtttccaccttctgaccatttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttggtagctcagtgagcacatcaggtctgatcctcctgtttccaccttctgaccatttct 680
Query: 481 ttccttcaccttccttcatcccacttttttttcaagc 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttccttcaccttccttcatcccacttttttttcaagc 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
