Query= MSMg01no429_j09.b1 MSMg01no429_j09.b1 CHROMAT_FILE:
MSMg01no429_j09.b1 PHD_FILE: MSMg01no429_j09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:07 2005
(586 letters)
>mm_chr1_130892433_130893419
Length = 987
Score = 1050 bits (543), Expect = 0.0
Identities = 576/587 (98%), Gaps = 1/587 (0%)
Strand = Plus / Minus
Query: 1 gcatccagtttccatgtttaccaagtctcatttctcatgtgttcttgtattttaacagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gcatccagtttccatgtttaccaagtctcatttctcatgtgttcttgtattttaacagat 728
Query: 61 gcaagcagcttttatgggtttccattcacttagggttcagggtgtgtcataggccattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gcaagcagcttttatgggtttccattcacttagggttcagggtgtgtcataggccattag 668
Query: 121 gagccctgtttaattctcatgaagaatttttggcctttttctatccttgacgacagtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gagccctgtttaattctcatgaagaatttttggcctttttctatccttgacgacagtagt 608
Query: 181 ctctgaatcctgagagtgagtcttgtgcacttttcagaatctccatagtaatgggtcaca 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 607 ctctgaatcctgagagtgagtcttgtgcacttttcaggatctccatagtaatgggtcaca 548
Query: 241 ggttctatttgctcgctatgacttggtgttttagctatagtattttatgagagcctggtt 300
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ggtactaagtgctcgctatgacttggtgttttagctatagtattttatgagagcctggtt 488
Query: 301 atgtgcctttaatggaagtattagtatgcccattttacatgggagaaaaatgaaccttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 atgtgcctttaatggaagtattagtatgcccattttacatgggagaaaaatgagccttgt 428
Query: 361 atcaatggatttatttaagatacattagctaataaacctcattccaagcccccccccc-a 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 427 atcaatggatttatttaagatacattagctaataaacctcattccaagccccccccccaa 368
Query: 420 aaaaaataggtgcttcagtgatttgatggggacaggccaatagcatagactgcgtctgtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 367 aaaaaataggtgcttcagtgatttgatggggacaggccaatagcatagactgcatctgtc 308
Query: 480 cctacacagtggtctgattaattacaaacactggctccatgccttacaggctgtgcaaat 539
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 catacacagtggtctgattaattacaaacactggctccatgccttacaggctgtgcaaat 248
Query: 540 ttagatatctaggccctttataatttcctacgccccatctattaaaa 586
||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 247 ctagatatctaggccctttataatttcctatgccccatttattaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 987
Length adjustment: 10
Effective length of query: 576
Effective length of database: 977
Effective search space: 562752
Effective search space used: 562752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_j09.g1 MSMg01no429_j09.g1 CHROMAT_FILE:
MSMg01no429_j09.g1 PHD_FILE: MSMg01no429_j09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:07 2005
(359 letters)
>mm_chr1_130712333_130713091
Length = 759
Score = 625 bits (323), Expect = 0.0
Identities = 350/359 (97%)
Strand = Plus / Plus
Query: 1 cttctacttactagatagtaattattttaagtgctagcattttttattttagaatgtttc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 cttctacttactagttagtaattattttaagtgctagcattttttattttagattgtttc 260
Query: 61 cagttgtagctgtattagctcaggttctagggaacacgagctttttgatgctagtgtttt 120
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 261 cagttgtagctgtattagctcaggttctagggaacacaatctttttgatgctagtgtgtt 320
Query: 121 ccaccctaacacaggttcttttctccttgcgtactttacctgggaatgtaggtggccatt 180
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 321 ccaccttaacacaggttcttttctccttgtgtactttacctgggaatataggtggccatt 380
Query: 181 ttacctctgagttcctttcgtcattaaaggttttgcttttcccaggatctttacagcgat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 ttacctctgagttcctttcgtcattaaaggttttgcttttcccaggatctttacagtgat 440
Query: 241 cactgatttttgtactaatttactaattccgcagtttctagaaaaggatttgagggcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactgatttttgtactaatttactaattccgcagtttctagaaaaggatttgagggcagt 500
Query: 301 ttgaaccacaggttttcctggcattccaaattctcacaagagaaaatatttgctcatcg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaaccacaggttttcctggcattccaaattctcacaagagaaaatatttgctcatcg 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
