Query= MSMg01no430_g18.b1 MSMg01no430_g18.b1 CHROMAT_FILE:
MSMg01no430_g18.b1 PHD_FILE: MSMg01no430_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:15 2005
(482 letters)
>mm_chr1_178456607_178457487
Length = 881
Score = 847 bits (438), Expect = 0.0
Identities = 469/482 (97%), Gaps = 7/482 (1%)
Strand = Plus / Plus
Query: 4 gaattcatagaatattcc---tacagtcattcacccaaatttctctagcgttttgtaatt 60
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcatagaataat--aaatacagtcattcacccaaatttctctagcgttttgtaatt 261
Query: 61 aagcctaaccttcacacagcctttagaaatccaagaaggatgaaaacagagagccacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagcctaaccttcacacagcctttagaaatccaagaaggatgaaaacagagagccacagg 321
Query: 121 gctcggctgggtagataggacacagagatcattcagtcttgagaaggtaaaactttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 gctcggctgggtagataggacacagagatcattcagtcttgagaaggtaaaacttaaaaa 381
Query: 181 agtactggtacttggctaggaggtgctaagtgacaaacagagggcatttgcacaaatctc 240
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agt--tggtacttggctaggaggtgctaagtgacaaacagagggcatttgcacaaatctc 439
Query: 241 ttctgcttagatcccatcctcccttccagctttcttcatgtacacattgagcatcttttc 300
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 440 ttctgcttagatcccatcctcccttccagctttcaccatgtacacattgagcatcttttc 499
Query: 301 ctaatgctcaaagaccatgcctaattctgcagccccacccccatgcatcccccactcatg 360
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 ctaatgctcagagaccatgcctaattctgcagccccacccccatgcatcacccactcatg 559
Query: 361 tatcctcccccaaaacaaaaaacaaagcacaggcatcacaggggtgacaaatgacaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatcctcccccaaaacaaaaaacaaagcacaggcatcacaggggtgacaaatgacaagaa 619
Query: 421 ccctgaggctctgacacttagtggtataaatatttatgtacctaataaagggagagacgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccctgaggctctgacacttagtggtataaatatttatgtacctaataaagggagagacgt 679
Query: 481 tc 482
||
Sbjct: 680 tc 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 881
Length adjustment: 10
Effective length of query: 472
Effective length of database: 871
Effective search space: 411112
Effective search space used: 411112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_g18.g1 MSMg01no430_g18.g1 CHROMAT_FILE:
MSMg01no430_g18.g1 PHD_FILE: MSMg01no430_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:15 2005
(170 letters)
>mm_chr1_178629276_178629845
Length = 570
Score = 313 bits (162), Expect = 3e-90
Identities = 168/170 (98%)
Strand = Plus / Minus
Query: 1 tttctacctttgtcctctgtgcaggacactgcaggaggctaatcttgatttaatacctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tttctacctttgtcctctgtgcaggacactgcaggaggctaatcttgatttaatacctcc 267
Query: 61 ctcaggtgcccttgcttttttatcctggttgatatgggtcaatgggagacctctatagaa 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 266 ctcaggtgcccttgcttttttatcctggttgatatgggtcagtgggagacctctatagaa 207
Query: 121 gctttgggggggcagggaggaaagatggagaaaggcagggagggagggag 170
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gctttggggggccagggaggaaagatggagaaaggcagggagggagggag 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
