Query= MSMg01no430_h03.b1 MSMg01no430_h03.b1 CHROMAT_FILE:
MSMg01no430_h03.b1 PHD_FILE: MSMg01no430_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:17 2005
(206 letters)
>mm_chr1_20522816_20523419
Length = 604
Score = 340 bits (176), Expect = 3e-98
Identities = 195/202 (96%), Gaps = 3/202 (1%)
Strand = Plus / Minus
Query: 5 gaattcaattttcactcacatataagttgatagtagtatagatgtctaagacatataaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 307 gaattcaattttcactcacatataagttgatagtagtatagatgtctaagacacataaat 248
Query: 65 gtactctaaaattttgtcttaaatattaaaaaaaaaaccagttttcggggtttgaagtga 124
||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 247 gtactctaaaattttgtcttaaatatt--aaaaaaaaccagtttt-gggatttgaagtga 191
Query: 125 tggccagtgattacaatcacttgttgctcttatagaggactggggtcagttcccagctca 184
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 190 tggccagtgattacaatcacttgttgctcttatagaggactgggttcagtccccagctca 131
Query: 185 cattggtctgtaattccagttt 206
||||||||||||||||||||||
Sbjct: 130 cattggtctgtaattccagttt 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 604
Length adjustment: 8
Effective length of query: 198
Effective length of database: 596
Effective search space: 118008
Effective search space used: 118008
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_h03.g1 MSMg01no430_h03.g1 CHROMAT_FILE:
MSMg01no430_h03.g1 PHD_FILE: MSMg01no430_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:17 2005
(200 letters)
>mm_chr1_20345606_20346205
Length = 600
Score = 373 bits (193), Expect = e-108
Identities = 196/197 (99%)
Strand = Plus / Plus
Query: 1 tctagaacaaacgtgctcaggagttttttatcagtagctcttgagctgcatttgttaaag 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctagaacaaacatgctcaggagttttttatcagtagctcttgagctgcatttgttaaag 260
Query: 61 agtctcaaaggctgcagctagactgtaattctagtaaatagcctcaggggtatgattatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtctcaaaggctgcagctagactgtaattctagtaaatagcctcaggggtatgattatt 320
Query: 121 ttttattgtctcatggtaagtatcctttggtcataatttacatcttaacttatgtcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttattgtctcatggtaagtatcctttggtcataatttacatcttaacttatgtcactc 380
Query: 181 ttccactaattacgatg 197
|||||||||||||||||
Sbjct: 381 ttccactaattacgatg 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
