Query= MSMg01no430_i13.b1 MSMg01no430_i13.b1 CHROMAT_FILE:
MSMg01no430_i13.b1 PHD_FILE: MSMg01no430_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:25 2005
(276 letters)
>mm_chr1_123508588_123509263
Length = 676
Score = 480 bits (248), Expect = e-140
Identities = 269/276 (97%)
Strand = Plus / Plus
Query: 1 gctatataagcacgggttatcttgcctgagtttttaacatgtattctgggcattgctctc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctatataagcacgtgttatcttgcctgagtttttaacatgtattctgggcattgctctc 260
Query: 61 tggtcctcatgctagtaaggcaggcacttaactgagttagctcctagcttgtaccttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtcctcatgctagtaaggcaggcacttaactgagttagctcctagcttgtaccttagt 320
Query: 121 gtcatgctgaaagagtttgagacctaatcattgaattttaatgtttttttttgttaaatg 180
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 gtcatgctgaaagagtttgagacctaatcattgaattttaatgggtttttttgttaaatg 380
Query: 181 ttagcaacagcagaaaagaccctgtgttctgaagaagcagagaaagcacagaataaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagcaacagcagaaaagaccctgtgttctgaagaagcagagaaagcacagaataaaagg 440
Query: 241 ttctttttttaacctctcttttcctttaaatccagt 276
||||| || |||||||||||||||||||| |||||
Sbjct: 441 ttcttgttcaaacctctcttttcctttaaagccagt 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_i13.g1 MSMg01no430_i13.g1 CHROMAT_FILE:
MSMg01no430_i13.g1 PHD_FILE: MSMg01no430_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:25 2005
(343 letters)
>mm_chr1_123713669_123714410
Length = 742
Score = 572 bits (296), Expect = e-168
Identities = 323/336 (96%), Gaps = 9/336 (2%)
Strand = Plus / Minus
Query: 11 tgtcaatgcttggtgttgtcaatgttgatttagaccattttattgactaagcagcagtca 70
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgtcaacgcttggtgttgtcaatgttgatttagaccattttattgactaagcagcagtca 683
Query: 71 ctcccagttgttttaatttccatttccccaatgaccaatataaaccatgttttcttctgc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctcccagttgttttaatttccatttccccaatgaccaatataaaccatgttttcttctgc 623
Query: 131 ttatttgacttctgtatgtcttcaatgagaagtgtagaatttttgtcacatcttcaatct 190
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttatttgacttctgtatatcttcaatgagaagtgtagaatttttgtcacatcttcaatct 563
Query: 191 gattattttctcattgctgagatgtggggaggtgagtaatcaatcctttgaga--tt--t 246
|||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
Sbjct: 562 gattattttctcattgctgagatgtggggaggtgagtaatcagtcctttgagagcttcgt 503
Query: 247 tttttttcatttatattttgatcatacccacacatacaccatctcttcccagatccactc 306
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 502 tt-----catttatattttgatcatacccacacatacaccaactcttcccagatccactc 448
Query: 307 cccttccctgtccatccaactttgtttcttttacta 342
||||||||||||||||||||||||||||||||||||
Sbjct: 447 cccttccctgtccatccaactttgtttcttttacta 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 742
Length adjustment: 9
Effective length of query: 334
Effective length of database: 733
Effective search space: 244822
Effective search space used: 244822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
