Query= MSMg01no432_o02.b1 MSMg01no432_o02.b1 CHROMAT_FILE:
MSMg01no432_o02.b1 PHD_FILE: MSMg01no432_o02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:47 2005
(255 letters)
>mm_chr1_186483644_186484298
Length = 655
Score = 474 bits (245), Expect = e-138
Identities = 251/253 (99%)
Strand = Plus / Plus
Query: 3 cacacacacacacacacacacacacacacacacacacacacacacactggttttgaaggc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cacacacacacacacacacacacacacacacacacacacacacacactggttttgaaggc 262
Query: 63 ttgtttctcagctggtaatgctattttgagagtctgtgaaacctttgaaaggtggaagta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttgtttctcagctggtaatgctattttgagagtctgtgaaacctttgaaaggtggaagta 322
Query: 123 ggtctctaggagtcagattgtaaaggttatggctagctttgttcctcatttaccttcttg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggtctctaggagtcagattgtaaaggttatggctagctttgttcctcatttaccttcttg 382
Query: 183 tcacgatgtagagtctccatcgtaccctactcctgtggtctgcctcgccttccttctcac 242
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 383 tcacgatgtagagtctccatcgtaccctactcctgtggtctgcctcaccttccttcccac 442
Query: 243 catgactggctgg 255
|||||||||||||
Sbjct: 443 catgactggctgg 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no432_o02.g1 MSMg01no432_o02.g1 CHROMAT_FILE:
MSMg01no432_o02.g1 PHD_FILE: MSMg01no432_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:47 2005
(364 letters)
>mm_chr1_186648177_186648938
Length = 762
Score = 601 bits (311), Expect = e-176
Identities = 351/365 (96%), Gaps = 4/365 (1%)
Strand = Plus / Minus
Query: 1 cacagacaaatagcttggaatgttgaactcattgccacttggagtaagggaattgggagt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 562 cacagacaaatagcttggaatgttgaactcattgtcacttggagtaagggaattgggagt 503
Query: 61 tggccagccttggcctgccaagctgtcattggctcacgtgcctgtggctgcagcgccctc 120
|||| |||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 502 tggcgagccttgg--tgccaagctgtctttggctcacatgcttgtggctgcagcgccctc 445
Query: 121 gtgtggtgaaaggagcgtagaactcctgcccgcttacagtcctgggccctttg-ctttcc 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct: 444 gtgtggtgaaaggagcgtagaacccctgcccgcttacagtcctgggccctttgccttt-c 386
Query: 180 agacaggcgttgtactggtcaccctccagtgggaggtttgccacgtgctgtctctggagt 239
||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| ||
Sbjct: 385 agacaggcgctgtactggtcaccctccagcgggaggtttgccacgtgctgtctttggtgt 326
Query: 240 tccactgtttgaacaccgtttgtcacatggtgtgaccttggcttttacaaagcttacgta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccactgtttgaacaccgtttgtcacatggtgtgaccttggcttttacaaagcttacgta 266
Query: 300 gttcctgggccaacggattgcttggaacatcgtgtttatttccaccagaagcagtttctt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttcctgggccaacggattgcttggaacatcgtgtttatttccaccagaagcagtttctt 206
Query: 360 ggagg 364
|||||
Sbjct: 205 ggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 762
Length adjustment: 9
Effective length of query: 355
Effective length of database: 753
Effective search space: 267315
Effective search space used: 267315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
