Query= MSMg01no433_b14.b1 MSMg01no433_b14.b1 CHROMAT_FILE:
MSMg01no433_b14.b1 PHD_FILE: MSMg01no433_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:05 2005
(413 letters)
>mm_chr1_97803819_97804631
Length = 813
Score = 748 bits (387), Expect = 0.0
Identities = 404/411 (98%), Gaps = 4/411 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcta--ttccgcttagtttgaatagtcactagttcagaaactatgactatttc 62
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctacatt--gcttagtttgaatagtcactagttcagaaactatgactatttc 262
Query: 63 caaataattaaaatctaggtgtcatgtgatccatttctaccacttctgggcataggtact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caaataattaaaatctaggtgtcatgtgatccatttctaccacttctgggcataggtact 322
Query: 123 tcaaatctcagtcaacatattgaagagatcatcacaaacacatacaagcaatgggaaagt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcaaatctcagtcaacatattgaagagatcatcacaaacacatacaagcaatgggaaagt 382
Query: 183 tatggtttctgcttaagaacccaagaacggatcaactgatgaacctctcgtgcatggatg 242
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 383 tatggtttctgcttaagaacccaagaacggatcaactgatgaacttctcgtgcatggatg 442
Query: 243 tgattggtctgcaaatcctcgtggaggctgagaagatcccactgcttcttgttggtaaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 443 tgattggtctgcaaatcctcgtggaggctgagaagatcccactgcttcttgttggcaaga 502
Query: 303 aaattaagaaaaaattttaaaaatctgatgtgagaaaacctattctgacttttgttttaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaattaagaaaaaattttaaaaatctgatgtgagaaaacctattctgacttttgttttaa 562
Query: 363 gtggatcatggcacatttcctcttaagtctatgtggttcaagacactggat 413
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtggatcatgacacatttcctcttaagtctatgtggttcaagacactggat 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_b14.g1 MSMg01no433_b14.g1 CHROMAT_FILE:
MSMg01no433_b14.g1 PHD_FILE: MSMg01no433_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:06 2005
(403 letters)
>mm_chr1_97937430_97938232
Length = 803
Score = 748 bits (387), Expect = 0.0
Identities = 399/403 (99%)
Strand = Plus / Minus
Query: 1 cacactcctaagccccttaccccataaaaacccctaactatctcctgtgtgggatgcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cacactcctaagccccttaccccataaaaacccctaactatctcctgtgtgggatgcatg 632
Query: 61 tctgtccggagctccgtcattagtcattaaactgcctcatgtgattacagcaaaatggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tctgtccggagctccgtcattagtcattaaactgcctcatgtgattacagcaaaatggat 572
Query: 121 tctcatgtttctttgggtgctctttcactcccgagactaaagtgggggtccccaaagggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tctcatgtttctttgggtgctctttcactcccgagactaaagtgggggtccccaaagggg 512
Query: 181 gtcttacactgctaaactacaatgggagatactaaagagattacaaaaatcatgatctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gtcttacactgctaaactacaatgggagatactaaagagattacaaaaatcatgatctag 452
Query: 241 gctaagggatcacaccttcaattccatgcagcgtattgaagctggagacttagctcactc 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gcaaagggatcacaccttcaattccatgcagcgtattgaagctggagacttagctcactc 392
Query: 301 tttagtttgctttgagtttctgaggtgactgggctgaacctttgaacagcattggaacag 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 391 tttagtttgctttgagtttctgaggtgactgggctgaacctttgaacaacattggaacag 332
Query: 361 atatgacccttatgtttcttggcgctgaagagatgactcagag 403
|||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 331 atatgacccttaggtttcttggggctgaagagatgactcagag 289
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
