Query= MSMg01no433_g21.b1 MSMg01no433_g21.b1 CHROMAT_FILE:
MSMg01no433_g21.b1 PHD_FILE: MSMg01no433_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:31 2005
(433 letters)
>mm_chr1_155612544_155613376
Length = 833
Score = 830 bits (429), Expect = 0.0
Identities = 432/433 (99%)
Strand = Plus / Minus
Query: 1 gtgtcgagacaccccagccagccatgggaatttggaaacatggggctgacatggcaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gtgtcgagacaccccagccagccatgggaatttggaaacatggggctgacatggcaacag 716
Query: 61 ctggccctaggaacctagagatttcagagctctgaaacagagggtctgccagggtgagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ctggccctaggaacctagagatttcagagctctgaaacagagggtctgccagggtgagac 656
Query: 121 cagccagccagactgctggtgccctactggttccttgccggtgccttgccggcggtagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cagccagccagactgctggtgccctactggttccttgccggtgccttgccggcggtagtg 596
Query: 181 tgggtgcttttaaatacttcacactacacacaacaaacactttgaccaactgaatcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgggtgcttttaaatacttcacactacacacaacaaacactttgaccaactgaatcatgt 536
Query: 241 tcccagcctgtccttttcacatttttaaagaacgaggctgaagagatgtctccgtgtgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tcccagcctgtccttttcacatttttaaagaacgaggctgaagagatgtctccgtgtgta 476
Query: 301 gaaccttaccttctacactgtttaacagtacgtgtttttcgcttctggacactctgggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaaccttaccttctacactgtttaacagtacgtgtttttcgcttctggacactctgggct 416
Query: 361 agccaacgtgcaagcctgtggaaacatagaagctgagattacagacgtatgctactaaac 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 agccaacgtccaagcctgtggaaacatagaagctgagattacagacgtatgctactaaac 356
Query: 421 acacccttcctta 433
|||||||||||||
Sbjct: 355 acacccttcctta 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_g21.g1 MSMg01no433_g21.g1 CHROMAT_FILE:
MSMg01no433_g21.g1 PHD_FILE: MSMg01no433_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:31 2005
(381 letters)
>mm_chr1_155441152_155441932
Length = 781
Score = 687 bits (355), Expect = 0.0
Identities = 371/381 (97%), Gaps = 8/381 (2%)
Strand = Plus / Plus
Query: 1 aaggccagacagggctaagtagagaaaccctgtctcaaaaacaaaaccacaacacccacc 60
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aaggccagacagggctatgtagagaaaccctgtctcaaaaacaaaaccacaagacccacc 260
Query: 61 cacccccatcccgtagtctttgttctaattttttcctaattgtgtattcaccaattaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacccccatcccgtagtctttgttctaattttttcctaattgtgtattcaccaattaagt 320
Query: 121 tcataataactagcaaacaaataacagacagggcagtcgagatggctagctgggtaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcataataactagcaaacaaataacagacagggcagtcgagatggctagctgggtaaagg 380
Query: 181 ggactgctaccaagcttgaggacttgagcttgggtcttcaggatccacatgagagagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggactgctaccaagcttgaggacttgagcttgggtcttcaggatccacatgagagagaga 440
Query: 241 gagagagagagagagagagagagagagagagagagagagagagagagatatctttcctga 300
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 gagagagagagagagagagagagagagagagagagagagaga--------tctttcctga 492
Query: 301 aaactgtcttctgatctctacgtgtgccatggcatacatgtatgtaccaactcgctcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaactgtcttctgatctctacgtgtgccatggcatacatgtatgtaccaactcgctcaga 552
Query: 361 ggataatggttatctaatttc 381
|||||||||||||||||||||
Sbjct: 553 ggataatggttatctaatttc 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
