Query= MSMg01no433_j21.b1 MSMg01no433_j21.b1 CHROMAT_FILE:
MSMg01no433_j21.b1 PHD_FILE: MSMg01no433_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:45 2005
(395 letters)
>mm_chr1_59379017_59379814
Length = 798
Score = 717 bits (371), Expect = 0.0
Identities = 388/395 (98%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctgagagtctcgtttgcccttgttacattctctctttcctgttttggggg--- 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgagaggctcgtttgcccttgttacattctctctttcctgttttgggggaaa 263
Query: 61 gaaaaaaaaaacaaacctcactcactaagtaggagtctgatgttgtgttctgcagttttt 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaaaaaaaaaaaaaacctcactcactaagtaggagtctgatgttgtgttctgcagttttt 323
Query: 121 atacacactggttaatggacttctcacaacagtctccctgggttgctgcagttgcggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atacacactggttaatggacttctcacaacagtctccctgggttgctgcagttgcggaag 383
Query: 181 tgaagctcaggcaagcatgtcgagttgctggcaagtgctaggccccgctttctgggctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaagctcaggcaagcatgtcgagttgctggcaagtgctaggccccgctttctgggctgg 443
Query: 241 atcagcaatcctccaaccttaacctcactagcaacatctggagcctattaaagacataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcagcaatcctccaaccttaacctcactagcaacatctggagcctattaaagacataat 503
Query: 301 aacagcaaacaactaacccatgtgtggcccctcccagacctgttaaatcaggctctctag 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacagcaaacaactaaccgatgtgtggcccctcccagacctgttaaatcaggctctctag 563
Query: 361 ggggtggagccaggccgccttcttttaaaagctct 395
|||||||||||||||||||||||||||||||||||
Sbjct: 564 ggggtggagccaggccgccttcttttaaaagctct 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 798
Length adjustment: 9
Effective length of query: 386
Effective length of database: 789
Effective search space: 304554
Effective search space used: 304554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_j21.g1 MSMg01no433_j21.g1 CHROMAT_FILE:
MSMg01no433_j21.g1 PHD_FILE: MSMg01no433_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:45 2005
(400 letters)
>mm_chr1_59529869_59530668
Length = 800
Score = 735 bits (380), Expect = 0.0
Identities = 395/400 (98%)
Strand = Plus / Minus
Query: 1 cacacccttggctaaggtccagtctggttacccctgagtttttcccagagtgctttgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cacacccttggctaaggtccagtctggttacccctgagtttttcccagagtgctttgtga 541
Query: 61 tatggctctaatagcctctggctctatttgggagcttctggactaagcaaggactccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tatggctctaatagcctctggctctatttgggagcttctggactaagcaaggactccctg 481
Query: 121 atagtcaggattctcgtggacggatagtgcagaggtgagcaggtctcttcccagggcccg 180
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atagtcaggattctcatggaccgatagtgcagaggtgagcaggtctcttcccagggcccg 421
Query: 181 ctgactgacacccaacttgtgtgatctattaggaaatccctgctcaacacgcagagtggt 240
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 420 ctgactgacacccaacttgtgtgatctattaggaaatccctgttcaacatgcagagtggt 361
Query: 241 cccttatgggacgcttgcccaaggctttctccccgttcacatttccacttaatctcctcc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cccttaagggacgcttgcccaaggctttctccccgttcacatttccacttaatctcctcc 301
Query: 301 ttctcccttccctgcctcccccctattattataaatagcactttaaactctagagccagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttctcccttccctgcctcccccctattattataaatagcactttaaactctagagccagg 241
Query: 361 ctcttcaattaaggtgtagacaaagtggtttgactccact 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctcttcaattaaggtgtagacaaagtggtttgactccact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
