Query= MSMg01no434_l10.b1 MSMg01no434_l10.b1 CHROMAT_FILE:
MSMg01no434_l10.b1 PHD_FILE: MSMg01no434_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:12 2005
(466 letters)
>mm_chr1_25260668_25261533
Length = 866
Score = 775 bits (401), Expect = 0.0
Identities = 441/459 (96%), Gaps = 9/459 (1%)
Strand = Plus / Plus
Query: 6 ggaattccccaggtgttactcaatattcaactcactttacttttgttagaaacattgtgt 65
|||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattccccgggtggtcctcaatattcaactcactttacttttgttagaaacattgtgt 265
Query: 66 gtttatatcattccgtatttatgcaccttgattcttgaatatacttccctgaataaatct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtttatatcattccgtatttatgcaccttgattcttgaatatacttccctgaataaatct 325
Query: 126 ccctgttgaaatgtttgtccctcaatcatttcttctttgggaccctagactgtaaaacac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccctgttgaaatgtttgtccctcaatcatttcttctttgggaccctagactgtaaaacac 385
Query: 186 acagtctttagaaatgcagttttagtcatgacttatttgatatatgtaaaggtaactaac 245
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 386 acagtctttagaaatgcagttttagccatgacctatttgatatatgtaaaggtaactaac 445
Query: 246 tgatattattaataacatcgtcctctttggcttgctg--tttttaataactttaatactt 303
||||||||||||||||||| |||| |||||||||||| | |||||||||||||
Sbjct: 446 tgatattattaataacatcatcctttttggcttgctgggt-------aactttaatactt 498
Query: 304 ttgtaatataaacagttgcatactattcatttccatatccatgtagattcagtctgcaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttgtaatataaacagttgcatactattcatttccatatccatgtagattcagtctgcaga 558
Query: 364 caccccttacaaatctttgtcgggattccaggaaaaaggacctctaggtgacacattatt 423
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 559 caccccttacaaatctttgtcaagattccaggaaaaaggacctctaggtgacacattatt 618
Query: 424 tatgtctcttttgagttccaagaataagcaataaccacc 462
|||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tatgtctcttttgagttccaagaataagcaataaccacc 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_l10.g1 MSMg01no434_l10.g1 CHROMAT_FILE:
MSMg01no434_l10.g1 PHD_FILE: MSMg01no434_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:12 2005
(512 letters)
>mm_chr1_25424813_25425724
Length = 912
Score = 951 bits (492), Expect = 0.0
Identities = 507/512 (99%)
Strand = Plus / Minus
Query: 1 tcttccttcagccactccagtgcttcatttgcatgaatacaccaccagcagcctgcaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tcttccttcagccactccagtgcttcatttgcatgaatacaccaccagcagcctgcaatt 653
Query: 61 tatttttgtctgaaacttcaagttttacttcggtaaaaatgtaagacagagcttaccgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tatttttgtctgaaacttcaagttttacttcggtaaaaatgtaagacagagcttaccgtt 593
Query: 121 agcatatagaatggacacttggggggagctgttcattatacctttgcatttatcatgaga 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 592 agcatatagaatggacacttggggggagctgtttattatacctttgcatttatcatgaga 533
Query: 181 aaatatgcacaaatctgtgacatgtgtttctggaaaatctcccagtcttgcctaataatg 240
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 532 aaatatgcacaaatctgtgacatgtgtttctgcaaaatctcccagtcttgcctaatcatg 473
Query: 241 taatatatcattcttgtgtcctctcatttcttggaaattgttttcaatgaatgcttttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 taatatatcattcttgtgtcctctcatttcttggaaattgttttcaatgaatgcttttga 413
Query: 301 aataatccatatttataattagtaacattgttactattacaacatattaaatattataaa 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aataatccatatttatcattagtaacattgttactattacaacatattaaatattataaa 353
Query: 361 ttcatgacatgttacagacatcaattattagtgacttcattcgtgcttttcaccttcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttcatgacatgttacagacatcaattattagtgacttcattcgtgcttttcaccttcacc 293
Query: 421 ctgcacccaaatgcagtctagttccattaactgtgctgcggataatgtgatcgtattctt 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 292 ctgcacccaaatgcagtctagttccattaactgtgctgtggataatgtgatcgtattctt 233
Query: 481 ttttagagctaaataaaattggattttctatg 512
||||||||||||||||||||||||||||||||
Sbjct: 232 ttttagagctaaataaaattggattttctatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
