XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACC
TGTGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCT
TAATCATCAGGGAAATGCAACTCAAAACAACCCTGAGATTCCACCTCACA
CCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCG
ACGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGC
TTGTACAACCACTCTGGAAATCAGGCTGGCAGTTCCTCAGAAAATTGGAC
ATAGTACTACTGGAGAATCCAGCAATACCTCTCCTGGGCATTTATCCAGA
AGATGCCCCGACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAG
CCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACA
GAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTC
AGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACC
TGGAGAGCATCATCCTGAGTGAGGGAACACATTCTCTAAGGAACTCTCCC
AATATGTTCTCACTGGATATGGGGATATTACCCCTAACTTATGATTTCCT
AACATATAAGGAATAATTTCGGGAAACTCTTTGGAACCTTCTGAACAATT
GGACAACTGTTTTGGGGTTTCCTTTGCCCCCTTCCTATAAATTGGTAATA
TTACN

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGGGTGGCAGCTTGATACTGTAGAAAATGGGTGA
CAAGCTCTGAGACATTCCTGCTGGTCCGAATCATGAAGAAGCAAGCAAAG
TAGTTTTGAGACATGAAGTGATCTTCAGGTTGGCCTGATGAGAAGGTCAG
AAAGGAGCCTTTTATTTTTAAAGGTGATTTGTTACAACAGAAGGCATGAC
TTCAATGTTCTGTTTCATAATGTCACATATAGCTTGTCTATATGCTGACG
TCCTCAAGTATGTCAGTCTCTGAAGAACCATTCTGGAAATGCTCTTATCT
GTGTTTTATGCTGTGGGGAAATTGTTTTATGTCACTGTTAGTGAAACAGG
TGTTTACATAGCACCTTGCAGCAAGGATGGGAGATACAGTGGAAGATGAG
AATGGGGAAGAAGACAGAGCCAAATATATTTAGGTTGTAGCCTAAGTTCA
TTATTTAATATGAGTTAGATAGGACTGGGGAGACGACTCAGTACAGTGAC
TGCTGTGTGTTCATGGGGATCTAATTTGGCACCTTCTGAACCCATGTCTA
ACACTGTAAGTGATAGTATGCCTCCGGTTTGGTGATGAAAACTTTTCTAA
ACTTATAAAGGCTTTTTTGATAGACCCCCCTTGTCCCCTTTTCCTTCCGG
CTTCTACATCTATACTCCCTCCTTTCTCTTGTGCCGTTTTATCCCTTGT

Query= MSMg01no434_p03.g1 MSMg01no434_p03.g1 CHROMAT_FILE:
MSMg01no434_p03.g1 PHD_FILE: MSMg01no434_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:30 2005
         (453 letters)



>mm_chr1_33179859_33180711
          Length = 853

 Score =  861 bits (445), Expect = 0.0
 Identities = 451/453 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggtggcagcttgatactgtagaaaatgggtgacaagctctgagacattcctgctggtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 agggtggcagcttgatactgtagaaaatgggtgacaagctctgagacattcctgctggtc 594

                                                                       
Query: 61  cgaatcatgaagaagcaagcaaagtagttttgagacatgaagtgatcttcaggttggcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cgaatcatgaagaagcaagcaaagtagttttgagacatgaagtgatcttcaggttggcct 534

                                                                       
Query: 121 gatgagaaggtcagaaaggagccttttatttttaaaggtgatttgttacaacagaaggca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gatgagaaggtcagaaaggagccttttatttttaaaggtgatttgttacaacagaaggca 474

                                                                       
Query: 181 tgacttcaatgttctgtttcataatgtcacatatagcttgtctatatgctgacgtcctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgacttcaatgttctgtttcataatgtcacatatagcttgtctatatgctgacgtcctca 414

                                                                       
Query: 241 agtatgtcagtctctgaagaaccattctggaaatgctcttatctgtgttttatgctgtgg 300
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtatgtcagtctctgaagaaccgttctggaaatgctcttatctgtgttttatgctgtgg 354

                                                                       
Query: 301 ggaaattgttttatgtcactgttagtgaaacaggtgtttacatagcaccttgcagcaagg 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggaaatcgttttatgtcactgttagtgaaacaggtgtttacatagcaccttgcagcaagg 294

                                                                       
Query: 361 atgggagatacagtggaagatgagaatggggaagaagacagagccaaatatatttaggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atgggagatacagtggaagatgagaatggggaagaagacagagccaaatatatttaggtt 234

                                            
Query: 421 gtagcctaagttcattatttaatatgagttaga 453
           |||||||||||||||||||||||||||||||||
Sbjct: 233 gtagcctaagttcattatttaatatgagttaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space:   373449
Effective search space used:   373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)