Query= MSMg01no435_f15.b1 MSMg01no435_f15.b1 CHROMAT_FILE:
MSMg01no435_f15.b1 PHD_FILE: MSMg01no435_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:03 2005
(411 letters)
>mm_chr1_78862305_78863115
Length = 811
Score = 702 bits (363), Expect = 0.0
Identities = 375/379 (98%)
Strand = Plus / Minus
Query: 33 tattatcaaacagataataaatagataattttacctactagttgtctaatgtaagtgtct 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tattatcaaacagataataaatagataattttacctactagttgtctaatgtaagtgtct 752
Query: 93 cgtgtgtagttaaaacaaggctaagtaaggtatgatgtttcaaaattaagtctgttaaga 152
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cgtgtgtagttaaaacaaggctaagtaaggtatgatgtttcaaaattaagtctgttaagt 692
Query: 153 gcattcttgacttacatagtaactttaacttatgtaaagttgtttagagagtgactctat 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gcattcttgacttacatagtaactttaacttatgtaaagttgtttagagagtgactctat 632
Query: 213 tgtacgtcaaagcccatctgtcaatgatctgcttgtgtcactctcagagtctccagctta 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgtacgtcaaagcccatctgtcaatgatctgcttgtgtcactctcagagtctccagctta 572
Query: 273 catgacatgttattgttttcaattagccaaagtcttcttacactcagttcatagttttca 332
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 catgacatggtattgttttcaattagccaaagtcttcttacactcagttcatagttttca 512
Query: 333 ccaaaattccagatagttaagcttttggaccactgaactcaaaataagtgacatgattag 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 511 ccaaaattccagatagttaagcttttggaccactgaactcaaaataagtgacatggttag 452
Query: 393 agagtgtgtcatcatggtt 411
||||||||||||| |||||
Sbjct: 451 agagtgtgtcatcgtggtt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_f15.g1 MSMg01no435_f15.g1 CHROMAT_FILE:
MSMg01no435_f15.g1 PHD_FILE: MSMg01no435_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:03 2005
(285 letters)
>mm_chr1_78693002_78693687
Length = 686
Score = 472 bits (244), Expect = e-137
Identities = 274/288 (95%), Gaps = 9/288 (3%)
Strand = Plus / Plus
Query: 1 atatcttgccagtgaggtcactgaacggatgaggtgcttgctgtgcaagtctgaggactg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 atatcttgccagtgaggtcactgaatggatgaggtgcttgctgtgcaagtctgaggactg 260
Query: 61 agttagttccaagaatccatgtaaaggtggaaggagacactcaagtctatgtaattgtcc 120
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 agttagttccaagaatccacgtaaaggtggaaggagacactcaagtccatgtaattgtcc 320
Query: 121 tctagctgccatgtatgcaccacggcacaggctgcatgcattgtcctatatcacatagat 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctagccgccatgtatgcaccacggcacaggctgcatgcattgtcctatatcacatagac 380
Query: 181 aacagttggaagtattaatcatatgggtgtgatttaaatatgaaggttgctcatagagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagttggaagtattaatcatatgggtgtgatttaaatatgaaggttgctcatagagtt 440
Query: 241 aatg---t--tttttttatgcatctaggaaatcatggatcggatctac 283
|||| | ||| |||||||||||||||||||||||||||||||
Sbjct: 441 aatgaactcattt----atgcatctaggaaatcatggatcggatctac 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 686
Length adjustment: 9
Effective length of query: 276
Effective length of database: 677
Effective search space: 186852
Effective search space used: 186852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
