Query= MSMg01no436_g06.b1 MSMg01no436_g06.b1 CHROMAT_FILE:
MSMg01no436_g06.b1 PHD_FILE: MSMg01no436_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:27 2005
(528 letters)
>mm_chr1_160487880_160488807
Length = 928
Score = 926 bits (479), Expect = 0.0
Identities = 516/529 (97%), Gaps = 4/529 (0%)
Strand = Plus / Plus
Query: 1 ttccacatcctcaaaagcca-gctgaagtgaacagcccttttcattcatctcttctcctt 59
||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ttccacatcctcaaaag-caggctgaaatgaacagcccttttcattcatctcttctcctt 259
Query: 60 ccctcagacagccttgtcatccaatggctcctctctctacttctcagctgtcctcccttc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccctcagacagccttgtcatccaatggctcctctctctacttctcagctgtcctcccttc 319
Query: 120 tgccactattttaaaagtaccaattctccactacttttcaccagaaaaatcaaactcccc 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 tgccactattttaaaagtaccaattctccactactttccaccagaaaaatcaaactcccc 379
Query: 180 atgcttgaaccacaaaccttctgctctgcttcctaactctacccccacaccttgaagcta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgcttgaaccacaaaccttctgctctgcttcctaactctacccccacaccttgaagcta 439
Query: 240 tgcatactgtatatttgatgaacagcaacacccgctgtgttaaattactgtaactgcctg 299
|| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 tgtatactggatatttgatgaacagcaacacccgctgtgttaaatcactgtaactgcctg 499
Query: 300 taaagctttctctttgtctgtcttgcatttctccaccacattgtccacaaaccaatagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taaagctttctctttgtctgtcttgcatttctccaccacattgtccacaaaccaatagaa 559
Query: 360 gttttctattgcaatccaatcaaatttagacttcttatgcttcctctgcaaaatatactg 419
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 560 gttttctattgcaatccaatcaaatttagatttcttatgctttctctgcaaaatatactg 619
Query: 420 tggtcctgttctccattgatcctttccttctttgtggctgtaacatctcaaggatatctc 479
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 620 tggtcctgttctccattgatcctttccttctttgtagctgtaacatcccaaggatatctc 679
Query: 480 cagtgaggacactttactgtgcacgtgagctctctgggtctctggggat 528
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 cagtgaggacactttactgtgcacgtgagctctctgggtctc--gggat 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_g06.g1 MSMg01no436_g06.g1 CHROMAT_FILE:
MSMg01no436_g06.g1 PHD_FILE: MSMg01no436_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:27 2005
(387 letters)
>mm_chr1_160640498_160641284
Length = 787
Score = 725 bits (375), Expect = 0.0
Identities = 384/387 (99%)
Strand = Plus / Minus
Query: 1 tctggtcatgacagacacagttggaaaggctgggtggattgctcagaccaccttccagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tctggtcatgacagacacagttggaaaggctgggtggattgctcagaccaccttccagac 471
Query: 61 acttgggaaggcaagaagaaaaggtggctggaaacataaccttggactgtgggaaagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acttgggaaggcaagaagaaaaggtggctggaaacataaccttggactgtgggaaagagg 411
Query: 121 tttgtggttggaaataagcattgtataataaatggaatgattccttggcattttctgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tttgtggttggaaataagcattgtataataaatggaatgattccttggcattttctgcaa 351
Query: 181 taattttcaaagtgccttcctgtgatttctggctatctgtgggtgagggggatttcacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 taattttcaaagtgccttcctgtgatttctggctatctgtgggtgagggggatttcacct 291
Query: 241 tttttgttttatgagtgaggaaactgagtgatggagagactcttagaaattggtatatgt 300
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttgctgttctatgagtgaggaaactgagtgatggagagactcttagaaattggtatatgt 231
Query: 301 agtaagcttcaggttgcacaagactccagattttgttttgtttagttttgttttgttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 agtaagcttcaggttgcacaagactccagattttgttttgtttagttttgttttgttctt 171
Query: 361 tgctcttaaatggaatgtgttttctgt 387
|||||||||||||||||||||||||||
Sbjct: 170 tgctcttaaatggaatgtgttttctgt 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
