Query= MSMg01no436_n18.b1 MSMg01no436_n18.b1 CHROMAT_FILE:
MSMg01no436_n18.b1 PHD_FILE: MSMg01no436_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:03 2005
(434 letters)
>mm_chr1_24226725_24227565
Length = 841
Score = 690 bits (357), Expect = 0.0
Identities = 399/417 (95%), Gaps = 7/417 (1%)
Strand = Plus / Minus
Query: 1 atgtgagagggacttctacaactcttgaaaccaccgccctgcccgatgtaaataaaag-- 58
||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 417 atgtgagagggacttctacaactcttgaaactaccaccctgccagatgtaaataaaagta 358
Query: 59 -----tatgactatgtgattcagaagagtaaactattaagactgttagaggaatctaaca 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agttatatgactatgtgattcagaagagtaaactattaagactgttagaggaatctaaca 298
Query: 114 tatattcataaaacatattcactttatatatagtaatcaacctactttctccagatatat 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tatattcataaaacatattcactttatatatagtaatcaacctactttctccagatatat 238
Query: 174 ccaacttacactgtgataacatcggaactagctagatcagtagttgtcaaccttgttgcg 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 237 ccaacttacactgtgataacatcggaactagctagatcagtagttgtcaaccttgttgag 178
Query: 234 accctttagtatacttcctcttgttatgctgaccccgaaccataaaattatcccattgct 293
|||||||| ||||||||||| |||||||||||||||||| |||||||||||| |||||||
Sbjct: 177 accctttaatatacttcctcgtgttatgctgaccccgaaacataaaattatctcattgct 118
Query: 294 acttcattactgtcattttgctactgttatgaatcataatgcaaatatttgatatgcagg 353
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 117 acttcattactgtcattttgctactgttatgaatcataatgtaaatatttgatatgcagg 58
Query: 354 atttattttcatttttacaaactggcccaaaagggttatgacccagaggttgggaac 410
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 57 atttattttcattattacaaactgacccaaaagggttatgacccagaggttgggaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 841
Length adjustment: 9
Effective length of query: 425
Effective length of database: 832
Effective search space: 353600
Effective search space used: 353600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_n18.g1 MSMg01no436_n18.g1 CHROMAT_FILE:
MSMg01no436_n18.g1 PHD_FILE: MSMg01no436_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:03 2005
(429 letters)
>mm_chr1_23998850_23999678
Length = 829
Score = 810 bits (419), Expect = 0.0
Identities = 425/427 (99%), Gaps = 1/427 (0%)
Strand = Plus / Plus
Query: 1 ggacagccttttggg-aacacttcaggtccccttgtgcttatctttgaacatgaggacct 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggacagccttttgggaaacacttcaggtccccttgtgcttatctttgaacatgaggacct 259
Query: 60 tcatacctcctatagcaggttggtctgatatcaatgaatgagagtgaaggcacggaagac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcatacctcctatagcaggttggtctgatatcaatgaatgagagtgaaggcacggaagac 319
Query: 120 tggatacacagagccttggacaggagcacagttcaaataaaattctgggcagtcagtgac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggatacacagagccttggacaggagcacagttcaaataaaattctgggcagtcagtgac 379
Query: 180 atagcctaatgagggtagaagtgggaggggctacatgaatagccctgtgtatttgtcact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atagcctaatgagggtagaagtgggaggggctacatgaatagccctgtgtatttgtcact 439
Query: 240 cttcctactaaggtggtaagatatcgataaaagcaatgtaagggaggatgggtttattta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttcctactaaggtggtaagatatcgataaaagcaatgtaagggaggatgggtttattta 499
Query: 300 gacgcatggtttcacagttcatcatggtggaaaccacagccacagaagcacagcgcagct 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacgtatggtttcacagttcatcatggtggaaaccacagccacagaagcacagcgcagct 559
Query: 360 ggtcacactggatccagttaggagccaggagagaaaaaaggatgaatgcccactgtactg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggtcacactggatccagttaggagccaggagagaaaaaaggatgaatgcccactgtactg 619
Query: 420 actagtt 426
|||||||
Sbjct: 620 actagtt 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
