Query= MSMg01no437_f11.b1 MSMg01no437_f11.b1 CHROMAT_FILE:
MSMg01no437_f11.b1 PHD_FILE: MSMg01no437_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:42 2005
(330 letters)
>mm_chr1_102364770_102365499
Length = 730
Score = 607 bits (314), Expect = e-178
Identities = 326/330 (98%)
Strand = Plus / Plus
Query: 1 tgaaatgtgatcacattctcacacttaaatgctcaaattaccctcatatgcctacagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaatgtgatcacattctcacacttaaatgctcaaattaccctcatatgcctacagcac 260
Query: 61 accactttccatcttcatgtgggaagagagacacatcttttgaggatgatcactggtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accactttccatcttcatgtgggaagagagacacatcttttgaggatgatcactggtagg 320
Query: 121 tttgtttgctccagtggaagacccaagcacccaacacttttcatatcagctcactgtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtttgctccagtggaagacccaagcacccaacacttttcatatcagctcactgtttg 380
Query: 181 cacaacacctgtgaaatggagtttataaatgtttctggaggagattacatattggatgcc 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaacaactgtgaaatggagtttataaatgtttctggaggagattacatattggatgcc 440
Query: 241 agccctgcactacatgtgccaacattcctttctgttgttttgcagccagtcatctgtctt 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 acccctgcactacatgtgccaacattcctttctgttgttttgcagccagtcatctctctt 500
Query: 301 aactgtaagatatattgtgtgaaatcatta 330
|||||||||||||||||| |||||||||||
Sbjct: 501 aactgtaagatatattgtctgaaatcatta 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_f11.g1 MSMg01no437_f11.g1 CHROMAT_FILE:
MSMg01no437_f11.g1 PHD_FILE: MSMg01no437_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:42 2005
(400 letters)
>mm_chr1_102539130_102539929
Length = 800
Score = 559 bits (289), Expect = e-163
Identities = 305/319 (95%), Gaps = 14/319 (4%)
Strand = Plus / Minus
Query: 1 tcttcctaagaccttcgtcaggtggctctcaactgcctgtacattctgcttccagggcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcttcctaagaccttcgtcaggtggctctcaactgcctgtacattctgcttccagggcct 246
Query: 61 ctgacacctcaggccttcaacagcacctagcatacattaagcgctcacatacatacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctgacacctcaggccttcaacagcacctagcatacattaagcgctcacatac-------- 194
Query: 121 acacatacacacacacacacacacacacacacacacacacaaaatttaaaatagtaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ------acacacacacacacacacacacacacacacacacaaaatttaaaatagtaaaca 140
Query: 181 taaaaatatgttttaattttaaatatattttaatattttaaatattaaaaatataattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 taaaaatatgttttaattttaaatatattttaatattttaaatattaaaaatataattaa 80
Query: 241 aattaaaaacatttctagaaaaactattatgctgaacaaaaccacaccaaacaaaatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aattaaaaacatttctagaaaaactattatgctgaacaaaaccacaccaaacaaaatttg 20
Query: 301 ttaaagttttttttgtttt 319
|||||||||||||||||||
Sbjct: 19 ttaaagttttttttgtttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
