Query= MSMg01no439_g14.b1 MSMg01no439_g14.b1 CHROMAT_FILE:
MSMg01no439_g14.b1 PHD_FILE: MSMg01no439_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:31 2005
(501 letters)
>mm_chr1_138423217_138424118
Length = 902
Score = 857 bits (443), Expect = 0.0
Identities = 485/499 (97%), Gaps = 3/499 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgaagctgaagtcgtgcttgcaacaaaccgttgagatgattgtatctgcgctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgaagctgaagtcgtgcttgcaacaaaccgttgagatgattgtatctgcgctg 264
Query: 65 agaggtaggcagccccctggggtctgaggctggacctgtgtgatcccagggctccctttc 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 agaggtaggcagccccctggggtctgcggctggacctgtgtgatcccagggctccctttc 324
Query: 125 cctccctgc-ctgagctgtgaccacagctcaccctacactatgcccatgtgcttagttcc 183
|||||| || | |||||||||||| ||| ||||||||||||||||| |||||||||||||
Sbjct: 325 cctcccggcac-gagctgtgaccatagcccaccctacactatgcccgtgtgcttagttcc 383
Query: 184 tagtgtaggagctcgggctgctgctgccaagcatgtcagcacctctgcccggagtcaggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagtgtaggagctcgggctgctgctgccaagcatgtcagcacctctgcccggagtcaggg 443
Query: 244 aagccagcgcctggccatcagagaggcacttatcgggaaaaccttcagtggttggagttg 303
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 aagccagcgcttggccatcagagaggcacttaacgggaaaaccttcagtggttggagttg 503
Query: 304 tggtgtaaggtccctgttacttaaaagact-gctagagtcatatgataacacgtgccgac 362
||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 504 tggtgtagggtccctgttacttaaaagacttgctagagtcatgtgataacacgtgccgac 563
Query: 363 acctggaactggtagcccaccttctcctgtccctcttttgtagggtgccccagtgacttg 422
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 acctggaactggtagcccaccttctcctttccctcttttgtagggtgccccagtgacttg 623
Query: 423 cactgtctcagaagctgcaccgagactatctgcagcctggctcgcaagcttcacagtgac 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cactgtctcagaagctgcaccgagactatctgcagcctggctcgcaagcttcacagtgac 683
Query: 483 ttcagcgcactctctgcct 501
|||||||||| ||||||||
Sbjct: 684 ttcagcgcacactctgcct 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 902
Length adjustment: 10
Effective length of query: 491
Effective length of database: 892
Effective search space: 437972
Effective search space used: 437972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_g14.g1 MSMg01no439_g14.g1 CHROMAT_FILE:
MSMg01no439_g14.g1 PHD_FILE: MSMg01no439_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:32 2005
(240 letters)
>mm_chr1_138568204_138568843
Length = 640
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Minus
Query: 1 cagggaacgccaatccatggggcacaaccaggggaagaagcggaggggtgattgctttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagggaacgccaatccatggggcacaaccaggggaagaagcggaggggtgattgctttgt 380
Query: 61 ccagaatgaacgctctagctcaaggttgccgggagcggagaggcattcaacaaagccaat 120
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 379 ccagaatgaatgctctagctcaaggttgctgggagcggagaggcattcaacaaagccaat 320
Query: 121 tgcatgccaggcgcaaccttggggcctgaaaccggaataaaaagaccatccacggagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgcatgccaggcgcaaccttggggcctgaaaccggaataaaaagaccatccacggagagt 260
Query: 181 tcacgttgtcatgggggaaagaactagtcagtaagtcccacagactgagcgctggaaaa 239
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 259 tcacgttgtcatgggggaaagaactagtcaataagtcccacagactgagcgctggaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
