Query= MSMg01no440_c09.b1 MSMg01no440_c09.b1 CHROMAT_FILE:
MSMg01no440_c09.b1 PHD_FILE: MSMg01no440_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:28 2005
(558 letters)
>mm_chr1_27729211_27730169
Length = 959
Score = 1011 bits (523), Expect = 0.0
Identities = 550/561 (98%), Gaps = 5/561 (0%)
Strand = Plus / Plus
Query: 1 atttctcattcttttaactttggaaactgagcctggtctgatgttgcattttatttattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttctcattcttttaactttggaaactgagcctggtctgatgttgcattttatttattt 260
Query: 61 tagtttatttcaaaagggacatatatatcccctggcaaagttttctaagaccaaatagtg 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtttatgccaaaagggacatatatatcccctggcaaagttttctaagaccaaatagtg 320
Query: 121 tagcaaaaatgtgtgaggtctcctttatacttttgaattctccaggaattaggccttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagcaaaaatgtgtgaggtctcctttatacttttgaattctccaggaattaggccttttc 380
Query: 181 ttccccacagcaaagtccacctcatagttttctgcctttccctttctgaggggtaggctt 240
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 381 ttccccacagcaaagtccacctcacagttttctgccttttcctttctgaggggtaggctt 440
Query: 241 tcttcttatatt---gtgcaactatgctgacacccccatttgacctttgactcaagtaat 297
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttcttat--taaagtgcaactatgctgacacccccatttgacctttgactcaagtaat 498
Query: 298 gtccacagcctctatcttgtcttgtttttaccaggtactagctaaaacaaaccagaaata 357
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtccacagactctatcttgtcttgtttttaccaggtactagctaaaacaaaccagaaata 558
Query: 358 tccaagatgtgaaatagaatccgaaacagataagtttacattctgtcttttcactcagat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tccaagatgtgaaatagaatccgaaacagataagtttacattctgtcttttcactcagat 618
Query: 418 ttcacaattttatttatatttagactctgaggaacccttaggttttatcagctcatctat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttcacaattttatttatatttagactctgaggaacccttaggttttatcagctcatctat 678
Query: 478 gcatatatgagtttgacatattgaggtttttaagtatgagattaatctaattaatatcta 537
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 679 gcatatatgagtttgacatattgaagtttttaagtatgagattaatctaattaatatcta 738
Query: 538 aacgcacaatactagagatag 558
|||||||||||||||||||||
Sbjct: 739 aacgcacaatactagagatag 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space: 520052
Effective search space used: 520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_c09.g1 MSMg01no440_c09.g1 CHROMAT_FILE:
MSMg01no440_c09.g1 PHD_FILE: MSMg01no440_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:28 2005
(474 letters)
>mm_chr1_27866044_27866917
Length = 874
Score = 909 bits (470), Expect = 0.0
Identities = 473/474 (99%)
Strand = Plus / Minus
Query: 1 tttgttttaatgctcacattttgtttggcttaaatgcagttgggcaaactcatagcacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tttgttttaatgctcacattttgtttggcttaaatgcagttgggcaaactcatagcacta 794
Query: 61 taactatgtctagttatattttattaataatataaacttttctgaatttggaaggtattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 taactatgtctagttatattttattaataatataaacttttctgaatttggaaggtattt 734
Query: 121 gtttaaataatattttaatttttcaaaatttgattttttattttataaagaatatataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gtttaaataatattttaatttttcaaaatttgattttttattttataaagaatatataac 674
Query: 181 tacaaataacacttaaagtgtttctgtgctacattttccttttttattttctatgcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tacaaataacacttaaagtgtttctgtgctacattttccttttttattttctatgcttag 614
Query: 241 attattatgttttgaaatattgttattcaaaactttagtatatatttttattgacattaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 attattatgttttgaaatattgttattcaaaactttagtatatatttttattgacattaa 554
Query: 301 tttttctcttgaaaacttctctaagagatagagtagtcacatgttaacttgctgaagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tttttctcttgaaaacttctctaagagatagagtagtcacatgttaacttgctgaagatt 494
Query: 361 gtaggctttctcttctttgggaaaagattccccaaactgtgactcaaatatatttctctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtaggctttctcttctttgggaaaagattccccaaactgtgactcaaatatatttctctc 434
Query: 421 ttaattatgctgtgtattctttccatatgctaacgtcttccagtgtcttgccct 474
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttaattatgctgagtattctttccatatgctaacgtcttccagtgtcttgccct 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
