NGGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAAGAAGGTTGACTCCAGAAAACCCAATAACAACATTAAA
AATGGGGCTCAGAGGTAAACAAAGAATTCTCACCTGAGGAACACTGAATG
GCTGAGAAGCACCTGAAAAAATGTTCAGCATCCTTAATCATCAGGGAAAT
GCAAATCAAAACCACATTGAGATTCCAGCTCTCACCAGTCAGAATGGCTA
AGATCAAAATTTTATGTAACAGCAGACGCTGGCGAGGATGTGGAGAAAGA
GGAACACTCCTCCATTGTTGGTGGGAGTGCAAGCTTGTACACACTAGATT
GGAAATCAGTTTGGCTGTCCCTCAGAAAATTGGAAATATTACTACCTCTC
CTGGACATATATCTAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTC
CACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAAC
CCCGATGCCCCTCAACAGAAGAATGAATAGAGAAAATGTGGTACATTTAC
ACAATGGAGTACTACTCAGCTTTTTAAAAAGAATGAATTTATGAAATTCC
TTATCCAATGGGATGGACCTGGAGGGCATCTTCCTAAGGGGAGGTAACCC
CATCCCCCAAAAAAGGCCCCATGGAAAAGGACCCCCCTGGAAAAGGGAAA
TATTAACTCCCAAAATTTCAAAAAACCTCCCGAAAAATAAATATCC

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTTCTACATAAAAAAAAG
ATTCCTCAGTCCTTCAGCAGGTATATCCATTAATCATGTAACTTATAACA
CATTAAATTATATGCACTCCCCATTTTTCTATAGGAGACTTTTGGTAGAA
AAAAATATTCAAAATATTCTATGAGTTGGATACGGACAGTTTGTCACAGG
TGTGTGATATCAAGTGCCATTGATGTATGTTTGTGAATTTTTGTCTTCTT
CTCATTATGGGAAATTTGTGATTATTTACTTTTAACACTAGACTAGTTTT
TTATTTCGCATAATTAATGGTGAGAATGAAACTAGTTTATTATCATAGTT
GATTATGCAATAGATAAAATATCACCAAGAGAACTTCCTATTAAAAATCT
GTGGCCACTCAGAAGGACATGATACCTTTCATTTTTTTTTATCATATCAA
AGTTTTAAAATACATTAGCTCATAGAATATAACCAACTTTGAAGCAAATT
ATTTTATTTTGCAATCTAATGAATGTACCCCAGTGCCTATCAGGAAAATA
TTTGTATCATATGTTTTGGCAGAAATTTCTTTCATATAATACTTTAATAA
ACATATTGCTGTGGGTTACACATAAACCACTATTAGAATCCTTTAGATAG
TTTTCATTAGCTTTTAAATGTAAAAATACTTTGTATTCCTAAAGCT

Query= MSMg01no440_e03.g1 MSMg01no440_e03.g1 CHROMAT_FILE:
MSMg01no440_e03.g1 PHD_FILE: MSMg01no440_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:38 2005
         (581 letters)



>mm_chr1_113728447_113729425
          Length = 979

 Score = 1077 bits (557), Expect = 0.0
 Identities = 575/581 (98%), Gaps = 2/581 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttttctacataaaaaaaagattcctcagtccttcagcaggtatatccattaatcatgta 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tttttctacatataaaaaagattcctcagtccttcagcaggtatatccattaatcatgta 720

                                                                       
Query: 61  acttataacacattaaattatatgcactccccatttttctataggagacttttggtagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 acttataacacattaaattatatgcactccccatttttctataggagacttttggtagaa 660

                                                                       
Query: 121 aaaaatattcaaaatattctatgagttggatacggacagtttgtcacaggtgtgtgatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aaaaatattcaaaatattctatgagttggatacggacagtttgtcacaggtgtgtgatat 600

                                                                       
Query: 181 caagtgccattgatgtatgtttgtgaatttttgtcttcttctcattatgggaaatttgtg 240
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 599 caagtgccattgatgtatgtttgtgaatttttgttttcttctcattatgggaaatttgtg 540

                                                                       
Query: 241 attatttacttttaacactagactagttttttatttcgcataattaatggtgagaatgaa 300
           ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 539 attatttacttttaacactagactagttttt-attttgcataattaatggtgagaatgaa 481

                                                                       
Query: 301 actagtttattatcatagttgattatgcaatagataaaatatcaccaagagaacttccta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 actagtttattatcatagttgattatgcaatagataaaatatcaccaagagaacttccta 421

                                                                       
Query: 361 ttaaaaatctgtggccactcagaaggacatgatacctttcatttttttttatcatatcaa 420
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttaaaa-tctgtggccactcagaaggacatgatacctttcatttttttttatcatatcaa 362

                                                                       
Query: 421 agttttaaaatacattagctcatagaatataaccaactttgaagcaaattattttatttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agttttaaaatacattagctcatagaatataaccaactttgaagcaaattattttatttt 302

                                                                       
Query: 481 gcaatctaatgaatgtaccccagtgcctatcaggaaaatatttgtatcatatgttttggc 540
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaatctaatgaacgtaccccagtgcctatcaggaaaatatttgtatcatatgttttggc 242

                                                    
Query: 541 agaaatttctttcatataatactttaataaacatattgctg 581
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaaatttctttcatataatactttaataaacatattgctg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 979
Length adjustment: 10
Effective length of query: 571
Effective length of database: 969
Effective search space:   553299
Effective search space used:   553299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)