Query= MSMg01no441_e17.b1 MSMg01no441_e17.b1 CHROMAT_FILE:
MSMg01no441_e17.b1 PHD_FILE: MSMg01no441_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:01 2005
(536 letters)
>mm_chr1_194466714_194467648
Length = 935
Score = 930 bits (481), Expect = 0.0
Identities = 522/541 (96%), Gaps = 11/541 (2%)
Strand = Plus / Plus
Query: 1 aacgcacttctgagactacttacaaagtgatcttctgaccttggcctcaaaagaccttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacgcacttctgagactacttacaaagtgatcttctgaccttggcctcaaaagaccttat 260
Query: 61 gacccaggcactatctcccatttagcagaccatggctagagcctgaaccaggcatgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacccaggcactatctcccatttagcagaccatggctagagcctgaaccaggcatgttgt 320
Query: 121 tctggcctggatagaaagaggtactcctctggagtaaggtacacagcagccaccatacac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tctggcctggatagaaagaggtactcctctggagtaaggtacacagcagccaccatactc 380
Query: 181 acagacaaaaacacccatttcccctccctggcacctcatcataactgagtaattccacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagacaaaaacacccatttcccctccctggcacctcatcataactgagtaattccacga 440
Query: 241 aaagcttttta-----ctggttttcccaccggcgggaaacagagagactaactcaggctg 295
||||| | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 aaagc-----aggagactggttttcccaccggcgggaaacagagagactaacccaggctg 495
Query: 296 aagagtccctgtgggtggacaagcaggcagccaaagttaaatatcactagggtgcacaag 355
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aagagtctctgtgggtggacaagcaggcagccaaagttaaatatcactagggtgcacaag 555
Query: 356 cctactgtgtacagtgacacagcaggaaacccagggaaaactatttaggctccacaggag 415
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 556 ccaactgtgtacagtgacacagcaggaaacccagggaaaactatt-aggctccacaggag 614
Query: 416 ccagaaaagccaggatggagtctggtcccaccagagaccacagcagcctgctcagcagcg 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 615 ccagaaaagccaggatggagtctggtcccaccagagaccacagcagcctgctcagcagtg 674
Query: 476 ccaggtaaaacaccagagtaaccagcatggagaggcacccctaggggagagccagcagcc 535
||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 675 ccatgtaaaacaccagagtaaccagcatggagagccaccactaggggagagccagcagcc 734
Query: 536 t 536
|
Sbjct: 735 t 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 935
Length adjustment: 10
Effective length of query: 526
Effective length of database: 925
Effective search space: 486550
Effective search space used: 486550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_e17.g1 MSMg01no441_e17.g1 CHROMAT_FILE:
MSMg01no441_e17.g1 PHD_FILE: MSMg01no441_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:01 2005
(463 letters)
>mm_chr1_194656666_194657527
Length = 862
Score = 826 bits (427), Expect = 0.0
Identities = 454/465 (97%), Gaps = 5/465 (1%)
Strand = Plus / Minus
Query: 1 tctggctgaaaccctggtggtagcaaaactatgcaggctgagtgtttagctgtaatcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tctggctgaaaccctggtggtagcaaaactatgcaggctgagtgtttagctgtaatcatt 603
Query: 61 aaagtagaggtagtggcctggatggtagctgttgtcatcaaagaatgtaataagagtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaagtagaggtagtggcctggatggtagctgttgtcatcaaagaatgtaataagagtgct 543
Query: 121 cgctggaggaaaaggccagccagccaaactcagatactgagctgtgtacactttggcctt 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cactggaggaaaaggccagccagccaaactcagatactgagctgtgtacactttggcctt 483
Query: 181 cccaggtctgtaccaggaacagaagtgccacaaaagtaagccagtatacacatgccttat 240
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 482 cccaggtctgtaccaggaacagaaatgccacaaaagtaagccagtatacacaagccttat 423
Query: 241 ataccttta--cacagtggtcattttctctaccaggggcacaaaaaagagccacatttct 298
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atacc---aaacacagtggtcattttctctaccaggggcacaaaaaagagccacatttcc 366
Query: 299 atccctgagtattctctgcagttgctgccccaccgtagcgtccactggggctcagagcta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atccctgagtattctctgcagttgctgccccaccgtagcgtccactggggctcagagcta 306
Query: 359 ctccagctggtatgattaaagcccgagttacaggacagtggcttcattttcaaggagctg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctccagctggtatgattaaagcccgagttacaggacagtggcttcattttcaaggagctg 246
Query: 419 cagaaacacacaggacccctggggcagcacaggcgctcctcagaa 463
|||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 245 cagaaacacacaggacccctggggcatcacaggcgcttctcagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 862
Length adjustment: 10
Effective length of query: 453
Effective length of database: 852
Effective search space: 385956
Effective search space used: 385956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
