Query= MSMg01no441_h20.b1 MSMg01no441_h20.b1 CHROMAT_FILE:
MSMg01no441_h20.b1 PHD_FILE: MSMg01no441_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:17 2005
(467 letters)
>mm_chr1_125425328_125426194
Length = 867
Score = 853 bits (441), Expect = 0.0
Identities = 458/465 (98%), Gaps = 4/465 (0%)
Strand = Plus / Minus
Query: 5 gaattctttagatttactaaccagatcttctagcttcataagtgagcaccaggctcaatg 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gaattctttagagttactaaccagatcttctagcttcataagtgagcaccaggctcaatg 608
Query: 65 aaagtcaatctctcaaaaagtatgataaaataaaagtgcaaattcagaagatattattgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aaagtcaatctctcaaaaagtatgataaaataaaagtgcaaattcagaagatattattgc 548
Query: 125 tacctttagatttatcatgtatgcatatacccatgtgtacatacccataaacacataaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tacctttagatttatcatgtatgcatatacccatgtgtacatacccataaacacataaac 488
Query: 185 atggacacacacataaagtaagattgccttaatgtgtttttttaaagggctactgcctag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atggacacacacataaagtaagattgccttaatgtgtttttttaaagggctactgcctag 428
Query: 245 cctgcttttgaagactgttctcatgagaagtgaaattttcatcaattatgttgattgaaa 304
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 427 cctgcttttgaagactgttctcatgaaaagtgaaattttcatcaattatgttgattgaaa 368
Query: 305 tggaaatagtggtttgattccccacccccatgcacagtgaacttaacattgaattattgt 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 367 tggaaatagtggtttgattccccacccccatgcacagtgaactttacattgaattattgt 308
Query: 365 ttacataggatgcacacagtagaattattgtgaccataaaatgctgatggttttccctca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttacataggatgcacacagtagaattattgtgaccataaaatgctgatggttttccctca 248
Query: 425 ttcttgtgtgtgtgtggta--tgtgtgtgtgtacatatttggatg 467
|||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 ttct--tgtgtgtgtggtatgtgtgtgtgtgtacatatttggatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_h20.g1 MSMg01no441_h20.g1 CHROMAT_FILE:
MSMg01no441_h20.g1 PHD_FILE: MSMg01no441_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:17 2005
(479 letters)
>mm_chr1_125253968_125254846
Length = 879
Score = 870 bits (450), Expect = 0.0
Identities = 470/477 (98%)
Strand = Plus / Plus
Query: 1 ctgatacctggcaccacaagatgtggctatattcagaggtagggctttaaagggacagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatacctggcaccacaagatgtggctatattcagaggtagggctttaaagggacagag 260
Query: 61 aaagtaaactggggctcttatggttggaagaatccagtcttactggtgctttgtgagtag 120
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 aaagtaaactgtggctcttatggttggcagaatccagtcttactggtgctttgtgagtag 320
Query: 121 aaatttgaactatagacaccagaacaccaaagaggggtcaagaacaagtacaatggaaga 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 aaatttgaactatagacaccagaacaacaaagaggggtcaagaacaagtacaatggaaga 380
Query: 181 ctaccgttttggcactttgctaatttttagtgttttaaacttaaaaacatattgtattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaccgttttggcactttgctaatttttagtgttttaaacttaaaaacatattgtattca 440
Query: 241 gtgcatcatttgttatgttgtttaaaaactatggtgactggagatatggctcaatagtta 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcatcatttattatgttgtttaaaaactatggtgactggagatatggctcaatagtta 500
Query: 301 aaaacacttgctctcctgaagaacaagaggttggtttccaccacttactagagagcctat 360
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 aaaacacttgctctcctgaataacaagagtttggtttccaccacttactagagagcctat 560
Query: 361 cacttgaactccatgtatctggcacagtgttgcagcctctcttgtatagtgtctgcactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacttgaactccatgtatctggcacagtgttgcagcctctcttgtatagtgtctgcactc 620
Query: 421 acatggacacactcccttcccacacagacataagaaaggataanataatattttata 477
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 acatggacacactcccttcccacacagacataagaaaggataagataatattttata 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
