TTTTTTAACCCCTTATCATAAACAAAAACTATTCTGGTAACTTACAGACG
AAAAATGCAACCAACCAAAAACCCCAAAAAGAATCGGCCAAATAAACAAT
ACTAAAAAAATATAAGATAAGGGGAAAGAGAAGTATCCCAAAAACTAAAT
CCCAAACACGAAGGTTAAAATAGCCCGCGGGGGTGGGTTTATATTTAAGT
GCGTCGGCGGGCGCGCTTTCCTTAAATAAAAATTTTTTGCCCGCGGGTTC
GGGCCTTTAAAATAAAAGGNAAAAATTTCCCCTTAAATTGCNAAAAAAAG
GGAANCCGCGGGNAAAAAAACCNNNGGTTATGTGCGACCAGAAAACAACA
ATTTTTTTAATGGGGGGTTAATTTTGAAATTTTTTTTGGAAGGTTCAAAA
TTTTTTTTTGAAACTTCTTTTAAAAAAATTGGGAAAAAAAAAATTCCCTC
TTTTTCAAAAATAAAGGGAATTTTTAAAAAAAAGGCTCTTTTTTTTCCAA
AAATTGGTGGGGGGGGAAAACTTTTTTTTAAAAATTATATTAAAAAAGGG
GTTTTTTTTTTTTTTTTATAAAAAAAAATTTTTTTTAAAAAATTTAATAA
AAAAAGTTTCTTTTTTTTTTTTTCAAAAAAATTTATTTTTTTTTTTATTC
CAAAAAACACCCCTCTTTGGGGGGGTGGTTTTTTTAAAAAAAAAAAAAAA
ATTTTTGAAGAATTTTTTTTTTTACAAAAAACTACGCGAAGAAAAGGGAT
TTTTTTTTCCTCCCTTTTTTTTTTTTTTTTTTTTT

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTACCTGTTCAATTATATTGATGT
TTCAAGCCTGTCATATATTTCCTTGGGAAGAAATGCGTGATTTAGAGATT
TTGGATCTAAGAGATTACAGGGCTTGAGTAAGAGTTCAGTGCAGAATGTA
TGATTAGTATGTGGCAGGCTTTAGGGAACTACAGCGTATTTTTCATTGAT
GATATTATTAACTTTCTTAACATGTGAGCAAGACAGAGTGTGGGCATTCA
GGTGCCATCATGAATTTATGAAAGTCAGAAGACAGAATTGTGGAGCCCAT
TCTCTTCTCCCACTACAGGTTCCAAAGATAGAACTTTAGTTTAAGGTTTG
AGCATGGAGTGTCCTTGCCCATTGAATCATCTTGCTATCTCTTCAGTGAA
TGCTATTATTCATGGCTTATCTTTGGTTACATCATGGGAAGGAACTGTAT
ACTTTAGAGCAAGGATAGGTCATGCTCACTTCTGAACCAGGTTGTGCCAT
TGTATAAGGAGAAAACAGTGGGAGAGTAGAGAGTGCATGTGATTCGGTAT
ACATAGACAAATGACTTTTACATGCTGAGTAAGCATTCCACTAACATTCA
TCAAGCCTGCATTCTCCTCTTTTTTATATATACCAGCAATTCTGAAAGTG
AATTTGTTCATCATGTTCTCAAAAGAAGTCCAAGGACTGTCTCTTAAGAA
CTTAA

Query= MSMg01no441_l02.g1 MSMg01no441_l02.g1 CHROMAT_FILE:
MSMg01no441_l02.g1 PHD_FILE: MSMg01no441_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:34 2005
         (611 letters)



>mm_chr1_105069279_105070289
          Length = 1011

 Score = 1065 bits (551), Expect = 0.0
 Identities = 596/611 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctacctgttcaattatattgatgtttcaagcctgtcatatatttccttgggaagaaatg 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tctacctgttcaatgatattgatgtttcaagcctgtcatatatttccttgggaagaaatg 752

                                                                       
Query: 61  cgtgatttagagattttggatctaagagattacagggcttgagtaagagttcagtgcaga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 751 agtgatttagagattttggatctaagagattacagggcttgagtaagagttcagtgtaga 692

                                                                       
Query: 121 atgtatgattagtatgtggcaggctttagggaactacagcgtatttttcattgatgatat 180
           ||||||||||||||||||||||| |||| |||||||||| |||| || ||||||||||||
Sbjct: 691 atgtatgattagtatgtggcaggatttaaggaactacagtgtatcttacattgatgatat 632

                                                                       
Query: 181 tattaactttcttaacatgtgagcaagacagagtgtgggcattcaggtgccatcatgaat 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tattaattttcttaacatgtgagcaagacagagtgtgggcattcaggtgccatcatgaat 572

                                                                       
Query: 241 ttatgaaagtcagaagacagaattgtggagcccattctcttctcccactacaggttccaa 300
           || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 571 ttgtgaaagtcagaagacagaattgtggatcccattctcttctcccactacaggttccaa 512

                                                                       
Query: 301 agatagaactttagtttaaggtttgagcatggagtgtccttgcccattgaatcatcttgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agatagaactttagtttaaggtttgagcatggagtgtccttgcccattgaatcatcttgc 452

                                                                       
Query: 361 tatctcttcagtgaatgctattattcatggcttatctttggttacatcatgggaaggaac 420
           |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 451 tatctcttcagtgaatgctattattcattgcttacctttggttacatcatgggaaggaac 392

                                                                       
Query: 421 tgtatactttagagcaaggataggtcatgctcacttctgaaccaggttgtgccattgtat 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 391 tgtatactttagagcaaggataggtcatgctcacttctgaaccagattgtgccattgtat 332

                                                                       
Query: 481 aaggagaaaacagtgggagagtagagagtgcatgtgattcggtatacatagacaaatgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 331 aaggagaaaacagtgggagagtagagagtgcatgtgattcggtatacatagacaagtgac 272

                                                                       
Query: 541 ttttacatgctgagtaagcattccactaacattcatcaagcctgcattctcctctttttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttttacatgctgagtaagcattccactaacattcatcaagcctgcattctcctctttttt 212

                      
Query: 601 atatataccag 611
           |||||||||||
Sbjct: 211 atatataccag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space:   601601
Effective search space used:   601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)