Query= MSMg01no441_m19.b1 MSMg01no441_m19.b1 CHROMAT_FILE:
MSMg01no441_m19.b1 PHD_FILE: MSMg01no441_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:43 2005
(392 letters)
>mm_chr1_21332055_21332845
Length = 791
Score = 719 bits (372), Expect = 0.0
Identities = 384/388 (98%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 4 aaaagggagaaattcagaggttgtgttggaggatttgagctggaatgaccctctttatca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaaagggagaaattcagaggttgtgttggaggatttgagctggaatgaccctctttatca 263
Query: 64 caacatccccatgaagacactctttcagtgacataatgttgtactcatcatgaccacaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caacatccccatgaagacactctttcagtgacataatgttgtactcatcatgaccacaga 323
Query: 124 tccctccacaagccatgtgatgctacagttggaacagagccagcccccgaccaagaccaa 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 tccctccacaagccatgtgatgctacagtgggaacagagccagcccccgaccaagaccaa 383
Query: 184 cctggacatctttatcaggatgcagttagaggtctggacctgtctctggctaccaggttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctggacatctttatcaggatgcagttagaggtctggacctgtctctggctaccaggttg 443
Query: 244 aataatgtattatctctttggacattactatgtctttcttgtgccaattcttctattgtt 303
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aataagg-attatctctttggacattactatgtctttcttgtgccaattcttctattgtt 502
Query: 304 ttgggttttgttagaattaactctatctgtaataaaaagctcacctctgtgaggaacagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttgggttttgttagaattaactctatctgtaataaaaagctcacctctgtgaggaacagt 562
Query: 364 agcaaaagtcatggtcagtctttgttga 391
|| |||||||||||||||||||||||||
Sbjct: 563 agtaaaagtcatggtcagtctttgttga 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 791
Length adjustment: 9
Effective length of query: 383
Effective length of database: 782
Effective search space: 299506
Effective search space used: 299506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_m19.g1 MSMg01no441_m19.g1 CHROMAT_FILE:
MSMg01no441_m19.g1 PHD_FILE: MSMg01no441_m19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:43 2005
(426 letters)
>mm_chr1_21495585_21496410
Length = 826
Score = 791 bits (409), Expect = 0.0
Identities = 421/425 (99%)
Strand = Plus / Minus
Query: 1 tctggaggttgctgtcaatctgttgaagcttatgtgattcaaacttgtacaggtaaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctggaggttgctgtcaatctgttgaagcttatgtgattcaaacttgtacaggtaaaagt 566
Query: 61 gcagagtgttcaaggaaccagaactaaagagacaggaaagtcgtgttctgggccttttag 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcagagtgttcaaggaaccagagctaaagagacaggaaagtcgtgttctgggccttttag 506
Query: 121 ctctgcagtcctgctacgttcttgtaggggaaactgagcacagagttctgtctactcaaa 180
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 505 ctctgcagtcctgctacgttctggtaggggaaactgagcacagagttctgtttactcaaa 446
Query: 181 acgatgcacatgaacgcttcagaaatagttttgagaaataaaatatattagttgtgtgac 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acgacgcacatgaacgcttcagaaatagttttgagaaataaaatatattagttgtgtgac 386
Query: 241 ttatggctgtctcaacctgtttcttgcagataccattgttctcatcgcttcaatagcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttatggctgtctcaacctgtttcttgcagataccattgttctcatcgcttcaatagcagt 326
Query: 301 tgtctctgcaaaaactcagggtaatattttcgccacgtcagcgctcagaagtctccggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtctctgcaaaaactcagggtaatattttcgccacgtcagcgctcagaagtctccggtt 266
Query: 361 cctacagatcctgcgtatggtgcgcatggacagaaggggagggacctggaagctgctcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctacagatcctgcgtatggtgcgcatggacagaaggggagggacctggaagctgctcgg 206
Query: 421 ctctg 425
|||||
Sbjct: 205 ctctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
