CCATCTAAATTGCGGCGCTAATAGAACACTAAATCCGAGCTGCNGGGAAN
CGCCACCTTACAGAACAGAGGTTTTTAGTAAGGTTATCTCAGCCGTGGAG
GGATAGACTCTGCCGCAGATCCTTATTGGCCTTGAGCCAGCTCATAATAA
TGCATAAAGCACAGCATGAGAGCCACCCTGCAGAATAGCAAATTGCTTTC
TGAATGCTTGGTGATCTTAACAAAAGATGGTGGTGTGGAGTCTTATGTTT
GTTCTCTAGGAAAATATAGGGAAATGAGGTAGTTGGGAAACGGAGATAAG
AAAAAAATTTTTTTTTTTCGGCNACACCTCTGGCAGCCTCCATTGTTATC
TTTTTTTACACTCGCACTATAAAAAAAATCTATCGTGTGCTCCACATATT
TACCCCCTCTCTTTTTTTTTTTTTTTCCGTCTTTCCCCTTTTTTCCTATT
TCTCTCCCCCTTTTTTTTTCTCCTCGTTCTCTTTTTGTCCACCACCCTTC
TTTTCCCCGTTTTCCCTTTTATCTCTTTTCCTCCCCTTTCTTTTCTTCCT
TTTTTCTTCCCATCCTCCTTTTCTTTTCTCCCTTTTTCCTTGCTGTTCTT
AAAAAATCTTCCCCACCCCTCCCCTTAATTTCCCTTTCTTATTCCTTTCC
CCCACTCCCTCCCCCAGTTTTATTTCCCTTTTCTACTTTACCCCCTTCTC
ATCCCTATTCCTTTTTCCA

TTCCGATGCTAGGGGTAGCCTGGCGGCCGCTGGATCAGAXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATGAAGCCCTATTTAAGCAAACAAAGCA
AAACAGACTTAAAAACCATTTATCAGAGGCCGACAAGATGGCTCAGCAGG
TAAAAAAGCCACCAAGCTTCGAGGTTGGCAACCCTAGATTGATCCCAAGA
AGTTTGCATCTCAAGCATTATGTAAAAAGCTGGGAAGACAGCGTTGGGAT
TGGGGTGGAAGGGTCTGCAGAGACAGCAGGATTCTGGTCGCTTATTGGTC
AGCAAGTACAGTCTTTCTTTATGCTCAGAGCTCACTGAGCGTCTCAAGAT
GGGCTGGTGTTGATGACAAGGAGACACTACGACAATACTCTCTGGCTTCC
TTCTTCTTGTGCCTATATTACTAAGGACAGCCCTTTCCTCCCTCTCCATC
CATGTATGACTCTCGTGACTAAATCCTTTTGTGACCCCCTCTGTATTTGG
TGCAGAACCAAATTTCCCCCCTTTATTCCCCCCCTTCTTTTGACCCTTCC
TTTTTATTTTCTTCCCCGTTTTTTCCCTTCACCTTCCATTGTTTCACACC
CCCCCCACTCTCCTTCCCTTTGGTTTACCCCTCCCCCCTTTTCATACTTG
TTGTCAGTTCCTTCCCACTGTTACCACCCCTCCTCTGCCTTTCTCCTATT
TTTACTTTTTCTTATCCCTGCTTAACCCCCATTTACTCTTCTCCCTTTCT
TTTTT

Query= MSMg01no443_g04.b1 MSMg01no443_g04.b1 CHROMAT_FILE:
MSMg01no443_g04.b1 PHD_FILE: MSMg01no443_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:58 2005
         (109 letters)



>mm_chr1_158985190_158985698
          Length = 509

 Score =  205 bits (106), Expect = 6e-58
 Identities = 106/106 (100%)
 Strand = Plus / Minus

                                                                       
Query: 4   gccttgagccagctcataataatgcataaagcacagcatgagagccaccctgcagaatag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gccttgagccagctcataataatgcataaagcacagcatgagagccaccctgcagaatag 250

                                                         
Query: 64  caaattgctttctgaatgcttggtgatcttaacaaaagatggtggt 109
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caaattgctttctgaatgcttggtgatcttaacaaaagatggtggt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space:    50601
Effective search space used:    50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)

Query= MSMg01no443_g04.g1 MSMg01no443_g04.g1 CHROMAT_FILE:
MSMg01no443_g04.g1 PHD_FILE: MSMg01no443_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:58 2005
         (244 letters)



>mm_chr1_158817486_158818130
          Length = 645

 Score =  422 bits (218), Expect = e-122
 Identities = 236/242 (97%), Gaps = 1/242 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagcccta-tttaagcaaacaaagcaaaacagacttaaaaaccatttatcagaggcc 59
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 atgaagccctaatttaagcaaacaaagcaaaacagacttaaaaaccatttatcagaagcc 260

                                                                       
Query: 60  gacaagatggctcagcaggtaaaaaagccaccaagcttcgaggttggcaaccctagattg 119
           |||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||
Sbjct: 261 gacaagatggctcagcaggtaaaaaagccaccaaacttcgaggctggcaacccgagattg 320

                                                                       
Query: 120 atcccaagaagtttgcatctcaagcattatgtaaaaagctgggaagacagcgttgggatt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcccaagaagtttgcatctcaagcattatgtaaaaagctgggaagacagcgttgggatt 380

                                                                       
Query: 180 ggggtggaagggtctgcagagacagcaggattctggtcgcttattggtcagcaagtacag 239
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ggggtggaagggtctgcagagacagcaggattctggacgcttattggtcagcaagtacag 440

             
Query: 240 tc 241
           ||
Sbjct: 441 tc 442


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space:   149460
Effective search space used:   149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)