MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-444D20
Chromosome	1 (Build37)
Map Location	155,232,298 - 155,232,723
singlet/doublet	singlet
Overlap gene	EG626058
Upstream gene	5730449L18Rik, Glt25d2, Rgl1, EG639787, Apobec4, Arpc5, Ncf2, Smg7, EG668097, Nmnat2, Lamc2, Lamc1, EG667795
Downstream gene	1700012A16Rik, Dhx9, Npl, LOC626096, Rgs8, Rgs16, Rnasel, LOC100043347, Rgsl1, 5830403L16Rik, EG433365, Teddm1, LOC100043357, Glul, LOC100043359
Link	Open Mouse BAC browser

Click to get alignment info.

name	5730449L18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66637 MGI:1913887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glt25d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269132 MGI:2138232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19731 MGI:107484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639787 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639787 MGI:3645261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 112 ESTs, 8 Proteins pseudo : _no_value

name	Apobec4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71281 MGI:1918531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arpc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67771 MGI:1915021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17970 MGI:97284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smg7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226517 MGI:2682334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668097 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668097 MGI:3648530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Nmnat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226518 MGI:2444155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lamc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16782 MGI:99913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lamc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226519 MGI:99914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667795 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667795 MGI:3645903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 4 Proteins

name	EG626058 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626058 MGI:3647713
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	1700012A16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71836 MGI:1919086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13211 MGI:108177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74091 MGI:1921341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626096
definition	note : sorbitol dehydrogenase-like pseudo : _no_value

name	Rgs8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67792 MGI:108408
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgs16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19734 MGI:108407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnasel (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24014 MGI:1098272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043347 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Rgsl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240816 MGI:2685048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	5830403L16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240817 MGI:1923273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433365 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433365 MGI:3646829
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Teddm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240819 MGI:2668439
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043357 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043357
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs

name	Glul (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14645 MGI:95739
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043359 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	5730449L18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803579 GeneID:66637 MGI:1913887
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730449L18 gene transcript_id : NM_025677.2

name	Glt25d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195810 GeneID:269132 MGI:2138232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycosyltransferase 25 domain containing 2 transcript_id : NM_177756.3

name	Rgl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131206 GeneID:19731 MGI:107484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ral guanine nucleotide dissociation stimulator,-like 1 transcript_id : NM_016846.3

name	Apobec4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487114 GeneID:71281 MGI:1918531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) transcript_id : NM_001081197.1

name	Arpc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385865 GeneID:67771 MGI:1915021
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin related protein 2/3 complex, subunit 5 transcript_id : NM_026369.1

name	Ncf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354494 GeneID:17970 MGI:97284
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neutrophil cytosolic factor 2 transcript_id : NM_010877.3

name	Smg7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53828717 GeneID:226517 MGI:2682334
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) transcript_id : NM_001005507.1

name	Nmnat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57863769 GeneID:226518 MGI:2444155
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nicotinamide nucleotide adenylyltransferase 2 transcript_id : NM_175460.3

name	Lamc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110624797 GeneID:16782 MGI:99913
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : laminin, gamma 2 transcript_id : NM_008485.3

name	Lamc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31791056 GeneID:226519 MGI:99914
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : laminin, gamma 1 transcript_id : NM_010683.1

name	EG667795 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234339 GeneID:667795 MGI:3645903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 4 Proteins product : predicted gene, EG667795 transcript_id : XM_001003554.2

name	EG626058 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234306 GeneID:626058 MGI:3647713
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : predicted gene, EG626058 transcript_id : XM_890619.3

name	1700012A16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362585 GeneID:71836 MGI:1919086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700012A16 gene transcript_id : NM_001033162.2

name	Dhx9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24429589 GeneID:13211 MGI:108177
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 9 transcript_id : NM_007842.1

name	Npl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21311854 GeneID:74091 MGI:1921341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetylneuraminate pyruvate lyase transcript_id : NM_028749.1

name	Rgs8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71143128 GeneID:67792 MGI:108408
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 8 transcript_id : NM_026380.3

name	Rgs16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388575 GeneID:19734 MGI:108407
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signaling 16 transcript_id : NM_011267.2

name	Rnasel (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982956 GeneID:24014 MGI:1098272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) transcript_id : NM_011882.1

name	LOC100043347 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234340 GeneID:100043347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043347 transcript_id : XM_001480344.1

name	Rgsl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234308 GeneID:240816 MGI:2685048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : regulator of G-protein signaling like 1 transcript_id : XM_994482.2

name	5830403L16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865982 GeneID:240817 MGI:1923273
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5830403L16 gene transcript_id : NM_178243.3

name	EG433365 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352757 GeneID:433365 MGI:3646829
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG433365 transcript_id : NM_001008426.2

name	Teddm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342452 GeneID:240819 MGI:2668439
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane epididymal protein 1 transcript_id : NM_178244.2

name	LOC100043357 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234342 GeneID:100043357
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : hypothetical protein LOC100043357 transcript_id : XM_001480351.1

name	Glul (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130944 GeneID:14645 MGI:95739
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate-ammonia ligase (glutamine synthetase) transcript_id : NM_008131.3

name	LOC100043359 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234344 GeneID:100043359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043359 transcript_id : XM_001480357.1

name	5730449L18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385138 CCDS:CCDS15363.1 GeneID:66637 MGI:1913887
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66637 protein_id : NP_079953.1

name	Glt25d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195811 CCDS:CCDS15364.1 GeneID:269132 MGI:2138232
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009103 - lipopolysaccharide biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glycosyltransferase 25 domain containing 2 protein_id : NP_808424.2

name	Rgl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543584 CCDS:CCDS15365.1 GeneID:19731 MGI:107484
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : ral guanine nucleotide dissociation stimulator-like 1 protein_id : NP_058542.2

name	Apobec4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487115 GeneID:71281 MGI:1918531
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) protein_id : NP_001074666.1

name	Arpc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385866 GeneID:67771 MGI:1915021
definition	GO_component : GO:0005885 - Arp2/3 protein complex [Evidence TAS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_process : GO:0030833 - regulation of actin filament polymerization [Evidence IEA] codon_start : 1 exception : mismatches in translation note : actin related protein 2/3 complex, subunit 5 (165 kDa) product : actin related protein 2/3 complex, subunit 5 protein_id : NP_080645.1

name	Ncf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754798 CCDS:CCDS15367.1 GeneID:17970 MGI:97284
definition	GO_component : GO:0001669 - acrosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016175 - superoxide-generating NADPH oxidase activity [Evidence ISS] GO_process : GO:0006742 - NADP catabolism [Evidence ISS]; GO:0006801 - superoxide metabolism [Evidence ISS] codon_start : 1 note : NADPH oxidase subunit (67 kD); NADPH oxidase subunit (67kDa) product : neutrophil cytosolic factor 2 protein_id : NP_035007.1

name	Smg7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53828718 GeneID:226517 MGI:2682334
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0051721 - protein phosphatase 2A binding [Evidence ISS] GO_process : GO:0000184 - mRNA catabolism, nonsense-mediated decay [Evidence IEA] [Evidence ISS]; GO:0006406 - mRNA export from nucleus [Evidence ISS]; GO:0035303 - regulation of dephosphorylation [Evidence ISS]; GO:0006445 - regulation of translation [Evidence ISS] codon_start : 1 product : SMG-7 homolog protein_id : NP_001005507.1

name	Nmnat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425202 CCDS:CCDS15368.1 GeneID:226518 MGI:2444155
definition	GO_function : GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA]; GO:0009435 - NAD biosynthesis [Evidence IEA]; GO:0019363 - pyridine nucleotide biosynthesis [Evidence IEA] codon_start : 1 note : pyridine nucleotide adenylyltransferase 2 product : nicotinamide nucleotide adenylyltransferase 2 protein_id : NP_780669.1

name	Lamc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110624798 CCDS:CCDS15369.1 GeneID:16782 MGI:99913
definition	GO_component : GO:0005605 - basal lamina [Evidence IEA]; GO:0005604 - basement membrane [Evidence IDA]; GO:0031012 - extracellular matrix [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0008201 - heparin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : nicein, 100kD; nicein, 100kDa; laminin gamma2 chain product : laminin, gamma 2 protein_id : NP_032511.3

name	Lamc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31791057 CCDS:CCDS15370.1 GeneID:226519 MGI:99914
definition	GO_component : GO:0005605 - basal lamina [Evidence IEA]; GO:0005604 - basement membrane [Evidence IDA]; GO:0031012 - extracellular matrix [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0005606 - laminin-1 [Evidence ISS] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IEA] [Evidence ISS]; GO:0007492 - endoderm development [Evidence ISS]; GO:0050679 - positive regulation of epithelial cell proliferation [Evidence ISS]; GO:0006461 - protein complex assembly [Evidence ISS] codon_start : 1 exception : mismatches in translation note : laminin B2 product : laminin, gamma 1 protein_id : NP_034813.1

name	EG667795 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363999 GeneID:667795 MGI:3645903
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003554.1

name	EG626058 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234307 GeneID:626058 MGI:3647713
definition	codon_start : 1 product : hypothetical protein protein_id : XP_895712.2

name	1700012A16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701672 CCDS:CCDS15372.1 GeneID:71836 MGI:1919086
definition	codon_start : 1 product : hypothetical protein LOC71836 protein_id : NP_001028334.1

name	Dhx9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24429590 GeneID:13211 MGI:108177
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003725 - double-stranded RNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 9; leukophysin; RNA helicase; nuclear DNA helicase II; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9 product : DEAH (Asp-Glu-Ala-His) box polypeptide 9 protein_id : NP_031868.1

name	Npl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311855 CCDS:CCDS15374.1 GeneID:74091 MGI:1921341
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0008747 - N-acetylneuraminate lyase activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : N-acetylneuraminate pyruvate lyase protein_id : NP_083025.1

name	Rgs8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789289 CCDS:CCDS15375.1 GeneID:67792 MGI:108408
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 product : regulator of G-protein signalling 8 protein_id : NP_080656.2

name	Rgs16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859610 CCDS:CCDS15376.1 GeneID:19734 MGI:108407
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : regulator of G-protein signaling 16 protein_id : NP_035397.1

name	Rnasel (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982957 CCDS:CCDS15377.1 GeneID:24014 MGI:1098272
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : 2-5A-dependent RNAase product : ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) protein_id : NP_036012.1

name	LOC100043347 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234341 GeneID:100043347
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480394.1

name	Rgsl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234309 GeneID:240816 MGI:2685048
definition	codon_start : 1 product : regulator of G-protein signaling like 1 protein_id : XP_999576.2

name	5830403L16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865983 CCDS:CCDS15378.1 GeneID:240817 MGI:1923273
definition	codon_start : 1 note : epididymal protein Me9 product : epididymal protein e9-2 protein_id : NP_839974.2

name	EG433365 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606033 CCDS:CCDS15379.1 GeneID:433365 MGI:3646829
definition	codon_start : 1 note : Teddm1-like product : hypothetical protein LOC433365 protein_id : NP_001008426.1

name	Teddm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30142685 CCDS:CCDS15380.1 GeneID:240819 MGI:2668439
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation function : putative membrane protein note : epididymal protein e9-1 product : transmembrane epididymal protein 1 protein_id : NP_839975.1

name	LOC100043357 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234343 GeneID:100043357
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480401.1

name	Glul (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982332 CCDS:CCDS15381.1 GeneID:14645 MGI:95739
definition	EC_number : 6.3.1.2 GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006542 - glutamine biosynthesis [Evidence IEA]; GO:0006807 - nitrogen compound metabolism [Evidence IEA] codon_start : 1 note : glutamate-ammonia ligase (glutamine synthase) product : glutamine synthetase protein_id : NP_032157.2

name	LOC100043359 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234345 GeneID:100043359
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480407.1

name	EG668097 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668097
definition	number : 2 pseudo : _no_value

name	EG668097 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668097
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:178478
definition	standard_name : AI427652

name	(CDS detail)
type	STS
link
xref	UniSTS:207228
definition	standard_name : RH126880

name	(CDS detail)
type	STS
link
xref	UniSTS:162998
definition	standard_name : RH126290

name	(CDS detail)
type	STS
link
xref	UniSTS:128871
definition	standard_name : D1Mit501

name	(CDS detail)
type	STS
link
xref	UniSTS:239278
definition	standard_name : D15Mit4

name	(CDS detail)
type	STS
link
xref	UniSTS:142256
definition	standard_name : D1Mit521

name	(CDS detail)
type	STS
link
xref	UniSTS:271393
definition	standard_name : PMC156340P1

name	(CDS detail)
type	STS
link
xref	UniSTS:180601
definition	standard_name : AB002664

name	(CDS detail)
type	STS
link
xref	UniSTS:234234
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128872
definition	standard_name : D1Mit502

name	(CDS detail)
type	STS
link
xref	UniSTS:128837
definition	standard_name : D1Mit47

name	(CDS detail)
type	STS
link
xref	UniSTS:128870
definition	standard_name : D1Mit500

name	(CDS detail)
type	STS
link
xref	UniSTS:163091
definition	standard_name : RH126383

name	(CDS detail)
type	STS
link
xref	UniSTS:231332
definition	standard_name : MARC_7499-7500:992008415:1

name	(CDS detail)
type	STS
link
xref	UniSTS:164132
definition	standard_name : AI843915

name	(CDS detail)
type	STS
link
xref	UniSTS:128757
definition	standard_name : D1Mit396

name	(CDS detail)
type	STS
link
xref	UniSTS:161761
definition	standard_name : RH124939

name	(CDS detail)
type	STS
link
xref	UniSTS:178479
definition	standard_name : J02930

name	(CDS detail)
type	STS
link
xref	UniSTS:128798
definition	standard_name : D1Mit43

name	(CDS detail)
type	STS
link
xref	UniSTS:165110
definition	standard_name : AI326842

name	(CDS detail)
type	STS
link
xref	UniSTS:272276
definition	standard_name : PMC24884P1

name	(CDS detail)
type	STS
link
xref	UniSTS:178789
definition	standard_name : AV000645

name	(CDS detail)
type	STS
link
xref	UniSTS:158868
definition	standard_name : 18.MHAa22T.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128440
definition	standard_name : D1Mit104

name	(CDS detail)
type	STS
link
xref	UniSTS:232008
definition	standard_name : RH142761

name	(CDS detail)
type	STS
link
xref	UniSTS:158867
definition	standard_name : U94828

name	(CDS detail)
type	STS
link
xref	UniSTS:186244
definition	standard_name : M-09515

name	(CDS detail)
type	STS
link
xref	UniSTS:224920
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:491904
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:225381
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:489555
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:490670
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:145998
definition	standard_name : AU049551

name	(CDS detail)
type	STS
link
xref	UniSTS:128784
definition	standard_name : D1Mit42

name	(CDS detail)
type	STS
link
xref	UniSTS:128821
definition	standard_name : D1Mit450

name	(CDS detail)
type	STS
link
xref	UniSTS:128889
definition	standard_name : D1Mit523

name	(CDS detail)
type	STS
link
xref	UniSTS:128542
definition	standard_name : D1Mit201

name	EG639787 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149234338 GeneID:639787 MGI:3645261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 112 ESTs, 8 Proteins product : predicted gene, EG639787 pseudo : _no_value transcript_id : XR_002131.2

clone name	MSMg01-277H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-436I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-479F19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-115I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-354P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-414D01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-096E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221E08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-444D20.T7 (MSMg01no444_d20.b1)	MSMg01-444D20.TJ (MSMg01no444_d20.g1)
ACC	AG533455	AG533456
length	766	748
length of high quality (start - end)	432 (48 - 479)	491 (76 - 566)
definition	CHROMAT_FILE: MSMg01no444_d20.b1 PHD_FILE: MSMg01no444_d20.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:12:05 2005	CHROMAT_FILE: MSMg01no444_d20.g1 PHD_FILE: MSMg01no444_d20.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:12:05 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NGGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGGATC CGCGGAATTCCAGGCTTACTATTCTGCATCAGGAACAGAGCCGACTTACC TAAGCCTTTCCCTCCAGGAAACACTTCACTTCCTCCAGTGTAATGACCCT CTTCCTTTTCCATACAATTCAATTGGAGACAAAGAGCTGCGATTTGATAC CTCCTCCCCTGTGCTGTGGGCGTGAACCTGGGGCTTTCAACATGGTAGTC GGGTTCTGTAACCTGATTTATATCCCAGCTCTTTTTGTTTCTTTCTGAAT TTTATCTTTTTATTTTTTAGGTATATCTATTATGTATATGGCATTCTGCC TGCATGTATGCCTGTGGCCCGAGCTGACCTTGTGCTCTGATAGCCCTCCA GGAATACAAGTGAATGCCAGAATGACAGTGCTCCAGCCTTCTAATGCCTT TTTTTTTAAAATAAATTTATGTCTGTGTGTGTGCGTATGTATGTCTGAGT GGACGCATGTCCTTCTTTTTTTCTTTTCCTCTTCTTTCCCNGAGAAAGGG TTTCTCTGCCTTTCCTGGTTCGGCCCGTTACCCTCCTTGATATATAAACT TGTCTTTTCCCTTTAAAATTTTTTTGGCCCCCTCCCCCCCCGTTATCTTT TTACCCCTTTTTTTACTTTTTTTTTTCCCCTTTCTTTCTCTTTTTTCCTC CATTTACCTACTTATTATCCAAATTTCCGTTTATTGTGTTTATTTTCCCG TTTGGTGTTCTTTTTT	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXACCAAAGCAGAAGGAGAAAGAAGTA GGAAAGTCAGACATAATAGAATAATCAGGCACACCAAGGCCAACTGAAAA GCAGTCATGCACAAATGAAATCTATACAGCCATTGTCCAGGGTTAAGATT GGGAGAAATGGAAACAACTATTTTTAACAAAGAGCTGCCTTGGGCTACTG AGATGTCTCCATTCCAGCCTACTGCAGGCAGTCCCTGTCATAGTATGCTG TCGCCAGCAAGTTCCTGCCTCCAGGTGCCTGCCTTGAGTTTCTACTTTGG CTTCCCCCAATGGGATGTGAGCTGAGATATGTAAGCCAAAGAAAGCCTTT CGTCCCCAAGTCGCTTTTGGTCATAGTATTTTATCCCAGCAATGGAACCC CTCACTAAGGCAGCACATAGCTGGTCATGATGGTGCATGCTTTTAGTCCC AGCACTAGGGAAGCAGCGGCAAGAGGATGTCTCAGTTCAAGGCTAGCTTG GTCTAGCTAAAGAGTTCCAGGGCAGCCTGAACTACATAGAGACCCTGTGT CCAAAAACTAAATTATCCAATAACAATCACCACAACTTCTAAGACAACAC CCCAAACATTGGATTCCATCATGACATTTTCATATACTTGCTTGTTCGTT TGCTTGATTGTTTGCATTCGTCTCTTCTCCCCTTTCCTCCACCCTTCC
quality values	Open. Hide. 0 3 6 6 6 8 8 8 10 10 11 12 23 25 33 32 30 27 28 37 37 32 30 29 32 30 33 37 37 28 28 28 28 28 30 27 27 9 9 9 9 9 9 12 12 15 17 22 28 28 28 43 47 43 35 35 30 30 31 31 33 33 33 30 27 27 12 9 11 11 11 11 22 22 30 30 33 33 41 41 47 47 53 53 53 53 53 53 53 57 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 68 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 62 62 62 62 68 68 62 62 62 33 33 12 18 23 38 38 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 68 68 59 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 57 57 43 43 43 59 59 57 57 57 57 57 57 57 57 52 52 52 57 57 57 57 59 59 54 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 59 50 54 50 57 57 57 59 59 59 59 47 47 48 48 48 43 48 37 37 37 42 44 59 59 48 57 57 57 57 57 43 39 39 39 37 37 44 40 43 43 37 37 44 44 48 42 42 35 35 35 42 47 43 47 40 42 30 28 28 32 37 37 32 32 37 39 31 37 37 43 28 33 33 59 39 39 30 37 30 37 37 46 34 34 18 18 11 11 11 25 27 39 41 42 41 37 34 24 19 15 24 17 23 23 30 34 41 39 39 32 32 23 28 28 32 20 20 15 26 19 22 9 8 8 9 8 19 10 17 10 11 11 21 25 32 31 18 14 10 10 13 14 14 12 15 8 6 6 10 8 10 10 10 10 10 10 10 13 27 21 19 10 8 8 10 10 13 11 17 16 24 20 20 18 18 15 15 10 8 8 3 0 3 8 8 8 10 13 13 12 12 12 16 10 10 10 10 10 10 11 13 13 15 10 10 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 9 8 12 8 9 13 15 8 8 10 9 9 8 8 8 8 11 9 9 9 13 10 10 10 8 8 8 8 8 8 9 8 9 9 8 8 8 9 9 12 19 19 14 14 10 10 8 8 8 10 8 10 14 14 10 10 10 10 13 16 11 9 8 8 8 8 8 8 9 12 11 9 10 10 10 10 10 15 18 19 12 12 12 11 11 11 13 15 19 19 20 20 16 10 9 9 9 9 11 10 9 9 11 11 10 10 12 11 11 11 14 16 19 23 29 21 15 12 8 8 8 6 6 8 8 10 8 8 8 8 8 10 10 9 9 12 12 13 19 14 10 10 10 8 10 8 8 8 8 8 10 6 6 6 8 9 9 9 8 10 9 9 9 10 10 11 10 10 10 10 10 10 8 8 8 8 8 8 8 8 9 9 9 9 14 11	Open. Hide. 8 8 8 11 8 8 8 8 8 13 9 9 9 18 19 30 29 31 28 32 37 39 37 37 39 37 37 44 27 18 23 9 9 9 16 9 9 9 11 11 16 16 15 26 22 37 37 34 32 33 28 28 33 33 37 37 29 23 13 13 8 8 8 8 9 9 11 16 15 10 10 11 16 16 20 27 25 30 25 23 32 39 39 39 37 37 37 32 31 37 44 44 44 59 44 31 31 37 37 37 37 44 41 37 44 37 37 37 37 37 37 48 48 48 48 43 43 40 34 34 37 37 37 40 40 40 36 47 48 57 57 57 53 48 48 48 48 48 37 37 37 37 37 33 39 39 37 37 39 59 59 47 42 50 50 50 50 50 53 50 50 50 47 47 43 43 43 47 40 40 40 47 47 57 59 59 59 57 57 57 48 48 48 57 59 48 48 46 41 39 48 59 48 43 43 36 37 37 57 57 57 57 57 57 59 36 41 41 41 41 41 57 57 57 43 43 43 57 57 57 57 57 57 68 68 68 57 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 52 52 52 57 57 57 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 59 59 59 57 59 59 57 57 57 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 57 59 59 59 52 52 57 59 59 59 59 68 68 68 68 59 59 59 59 57 57 43 43 43 39 35 23 27 43 43 62 62 68 68 68 68 68 68 62 62 62 62 68 68 62 62 62 62 62 62 62 68 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 39 62 62 57 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 52 52 52 57 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 59 59 59 52 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 59 47 35 35 35 43 43 43 35 42 43 43 44 28 33 33 34 32 17 17 17 22 30 44 42 39 37 44 43 42 44 43 43 43 59 59 57 32 32 20 20 20 34 32 47 43 46 37 43 36 34 30 13 12 13 12 18 18 18 14 14 21 21 25 25 25 28 37 37 39 42 37 30 26 28 28 25 24 14 14 26 27 39 39 32 30 37 37 37 37 39 41 37 32 24 19 20 22 27 12 14 14 28 28 28 24 24 22 17 17 17 29 26 28 20 17 14 14 16 17 16 16 15 15 15 15 27 18 12 12 12 22 16 20 20 24 24 25 24 27 30 22 25 28 22 22 12 12 11 10 10 10 10 14 10 9 9 8 8 10 12 8 12 14 18 22 18 15 15 9 9 9 9 11 11 11 20 12 8 8 6 6 8 8 9 9 8 13 10 10 8 8 10 9 9 10 11 11 12 14 12 13 11 11 14 11 11 11 11 16 19 10 10 10 10 10 12 18 19 18 16 12 10 10 8 8 8 10 8 8 8 10 10 17 11 10 10 13 9 9 9 10 10 18 15 14 18 19 15 10 8 6 6 8 10 13 10 10 10 10 10 10 8 8 8 13 10 8 8 8 8 8 10 11 20 23 20 12 12 12 9 9 10 15 11 11 11 11 16 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no444_d20.b1 MSMg01no444_d20.b1 CHROMAT_FILE:
MSMg01no444_d20.b1 PHD_FILE: MSMg01no444_d20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:05 2005
         (432 letters)



>mm_chr1_155232092_155232923
          Length = 832

 Score =  816 bits (422), Expect = 0.0
 Identities = 425/426 (99%)
 Strand = Plus / Plus

                                                                       
Query: 7   ggaattccaggcttactattctgcatcaggaacagagccgacttacctaagcctttccct 66
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattccaggcttacaattctgcatcaggaacagagccgacttacctaagcctttccct 266

                                                                       
Query: 67  ccaggaaacacttcacttcctccagtgtaatgaccctcttccttttccatacaattcaat 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccaggaaacacttcacttcctccagtgtaatgaccctcttccttttccatacaattcaat 326

                                                                       
Query: 127 tggagacaaagagctgcgatttgatacctcctcccctgtgctgtgggcgtgaacctgggg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggagacaaagagctgcgatttgatacctcctcccctgtgctgtgggcgtgaacctgggg 386

                                                                       
Query: 187 ctttcaacatggtagtcgggttctgtaacctgatttatatcccagctctttttgtttctt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctttcaacatggtagtcgggttctgtaacctgatttatatcccagctctttttgtttctt 446

                                                                       
Query: 247 tctgaattttatctttttattttttaggtatatctattatgtatatggcattctgcctgc 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tctgaattttatctttttattttttaggtatatctattatgtatatggcattctgcctgc 506

                                                                       
Query: 307 atgtatgcctgtggcccgagctgaccttgtgctctgatagccctccaggaatacaagtga 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atgtatgcctgtggcccgagctgaccttgtgctctgatagccctccaggaatacaagtga 566

                                                                       
Query: 367 atgccagaatgacagtgctccagccttctaatgcctttttttttaaaataaatttatgtc 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atgccagaatgacagtgctccagccttctaatgcctttttttttaaaataaatttatgtc 626

                 
Query: 427 tgtgtg 432
           ||||||
Sbjct: 627 tgtgtg 632


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information