NTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGG
AATTCTCACCTGATGACTACCGAATGGCAGAGAAGCACCTGAAAAAATGT
TCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT
CCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCA
GATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGG
GATTGCAGGCTTGTACAACCACTGTGGAAATCCGTCTGGCGGTTCCTCAG
AAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCTTGGGCA
TATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATG
TTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATG
CCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGG
AGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAA
TGGATGGAACTGGAGGGCATCATCCTGAGTGAGGGACACATTCCCCAAGG
AACTCCACAATATGTACTCTCTGATAAGGGATATTATCCCCAACCTACGA
GACCCCCGAATAAAAAAAAATTTCCTAACTCTTGGAACTCCTAAAAATGA
AAATGGAGGGGGGGCCCAATCCCCCTTTTAAAAGGGAAAAAACCCCCCGN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTAATCAAAAAAGGAGGGCA
ATAGAGAGCATTTCAGTTCAAATCAGTGATACCTAAAAGGGTCGCAGCCA
CTTCAGCTGTCTTTTAGCACAATGCCACGCAGATGATGTCACCAATATGT
ACCTATAATCTCCGCTTCCTAATTTTCTTCCTCTCTCCAGATTATAAGCC
TTCTGGAAGTGCAACCTTTCAATGAAATGAAACCACACCTCCTGGATACC
CGAGCAGCCTTTTAAAATTCCTTATCTGAGTAGGCTAGTTGTACTGTTGA
GCCACTTGGTTCTAGTTCTTTTCAAAAGAAAATTGCCAAGGTTAAGGGTA
ATTCTGCAGAGCTCTTGTGCACATTTGAAGAAGTGATATAGATCATCAAA
TTTGATATCCCAGGACCCATCATTTCTCCATAGTTCATGTACTGGCTGGT
TTTGTGTGTCAACTGGACACAAGCTGGATTTATCACAGAGGAAGGAGCTT
CAGGTGAGGAAATGCCTCCATGAGATCCAACTGAAAGGCATTTTCTCAAT
TAGTGATCAAGGGGGAAGGGCCCATTGTGGGTGATGCCATCCCTGGGCTG
GTGGTCCTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCTAGGGGAAGCAA
GCCCATAAGTAACACCCCTCCATGGCCTCTGCATCA

Query= MSMg01no444_e22.g1 MSMg01no444_e22.g1 CHROMAT_FILE:
MSMg01no444_e22.g1 PHD_FILE: MSMg01no444_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:10 2005
         (569 letters)



>mm_chr1_166575826_166576794
          Length = 969

 Score = 1056 bits (546), Expect = 0.0
 Identities = 564/570 (98%), Gaps = 2/570 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctaatcaaaaaaggagggcaatagagagcatttcagttcaaatcagtgatacctaaaag 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 201 tctaatcaaaaaaggagggcaatagagagcatttcagttcaaatcagtgatacctggaag 260

                                                                       
Query: 61  ggtcgcagccacttcagctgtcttttagcacaatgccacgcagatgatgtcaccaatatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcgcagccacttcagctgtcttttagcacaatgccacgcagatgatgtcaccaatatg 320

                                                                       
Query: 121 tacctataatctccgcttcctaattttcttcctctctccagattataagccttctggaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacctataatctccgcttcctaattttcttcctctctccagattataagccttctggaag 380

                                                                       
Query: 181 tgcaacctttcaatgaaatgaaaccacacctcctggatacccgagcagccttttaaaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcaacctttcaatgaaatgaaaccacacctcctggatacccgagcagccttttaaaatt 440

                                                                       
Query: 241 ccttatctgagtaggctagttgtactgttgagccacttggttctagttcttttcaaaaga 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ccttatctgagtaggctagttgtactgttgagccatttggttctagttcttttcaaaaga 500

                                                                       
Query: 301 aaattgccaaggttaagg-gtaattctgcagagctcttgtgcacatttgaagaagtgata 359
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattgccaaggtta-ggcgtaattctgcagagctcttgtgcacatttgaagaagtgata 559

                                                                       
Query: 360 tagatcatcaaatttgatatcccaggacccatcatttctccatagttcatgtactggctg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tagatcatcaaatttgatatcccaggacccatcatttctccatagttcatgtactggctg 619

                                                                       
Query: 420 gttttgtgtgtcaactggacacaagctggatttatcacagaggaaggagcttcaggtgag 479
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttttgtgtgtcaacttgacacaagctggatttatcacagaggaaggagcttcaggtgag 679

                                                                       
Query: 480 gaaatgcctccatgagatccaactgaaaggcattttctcaattagtgatcaagggggaag 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaaatgcctccatgagatccaactgaaaggcattttctcaattagtgatcaagggggaag 739

                                         
Query: 540 ggcccattgtgggtgatgccatccctgggc 569
           ||||||||||||||||||||||||||||||
Sbjct: 740 ggcccattgtgggtgatgccatccctgggc 769


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)