Query= MSMg01no444_n02.b1 MSMg01no444_n02.b1 CHROMAT_FILE:
MSMg01no444_n02.b1 PHD_FILE: MSMg01no444_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:50 2005
(564 letters)
>mm_chr1_109479019_109479982
Length = 964
Score = 1009 bits (522), Expect = 0.0
Identities = 531/534 (99%)
Strand = Plus / Minus
Query: 31 ggaacaagtcagtaagcaacatgcttactccatagttcctctgtaccttctggttcctac 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 ggaacaagtcagtaagcaacatgcttactccatagttcctctgtaccttctggttcctac 905
Query: 91 ctcagtgttttagtcctgctcctgtcctgacattcatcagcaatggaatttgacttgaga 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ctcagtgttttagtcctgctcctgtcctgacattcatcagcaatggaatttgacttgaga 845
Query: 151 gttttaagctaaaataaactctttccttcttggccattgtgtttttatcacagcaataga 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gttttaagctaaaataaactctttccttcttggccattgtgtttttatcacagcaataga 785
Query: 211 aaccctaaataagacacaatatattcctattatctctattatctatatattctctctcct 270
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aaccctaaataagacacaagatattcctattatctctattatctatatattctctctcct 725
Query: 271 gcactggggatctcactttgagaccagctgtgagctatagaaagcagaagtgacacttgc 330
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gcactggggaactcactttgagaccagctgtgagctatagaaagcagaagtgacacttgc 665
Query: 331 atagacatagttcttacaaaaatgaagagtttccactttcaatgactcataattcaacaa 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 atagacatagttcttacaaaaatgaagagtttccactttcaatgactcataattcaacaa 605
Query: 391 ccaaaatataggaagcctaaactaccataggaaatgccacataaaaggattctagtggaa 450
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ccaaaatataggaagtctaaactaccataggaaatgccacataaaaggattctagtggaa 545
Query: 451 tcaaaaggtcctttgttccttgtagaagggttgatccctctactgtgagtaattcaggct 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcaaaaggtcctttgttccttgtagaagggttgatccctctactgtgagtaattcaggct 485
Query: 511 ttcttggttctcacatcccagcttctagctacatcacccacatgagtgagcttc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttcttggttctcacatcccagcttctagctacatcacccacatgagtgagcttc 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_n02.g1 MSMg01no444_n02.g1 CHROMAT_FILE:
MSMg01no444_n02.g1 PHD_FILE: MSMg01no444_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:50 2005
(357 letters)
>mm_chr1_109270253_109271009
Length = 757
Score = 690 bits (357), Expect = 0.0
Identities = 357/357 (100%)
Strand = Plus / Plus
Query: 1 acctgtctctgctttccatctcttgtaggagaactgaggttacaagtgcatactgacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctgtctctgctttccatctcttgtaggagaactgaggttacaagtgcatactgacaca 260
Query: 61 cctgacttttgcatggttctggctatgcgaactcagcccctcacacttgcataggaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgacttttgcatggttctggctatgcgaactcagcccctcacacttgcataggaagtc 320
Query: 121 atttactcactgggccatattcccagacccgtccttgcactatttttctgctgcctctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttactcactgggccatattcccagacccgtccttgcactatttttctgctgcctctca 380
Query: 181 attgtcccttcttttccagcaatatgtaagatgttgtgagaaactgtaccaagccaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgtcccttcttttccagcaatatgtaagatgttgtgagaaactgtaccaagccaagct 440
Query: 241 gcaaactgttgattttgaactatctacagaagagacaaggaaaagtattaacgcttgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaactgttgattttgaactatctacagaagagacaaggaaaagtattaacgcttgggt 500
Query: 301 taaaaataaaactaatggtaaggataattgtgtgtgtgtgtgtgtgtgtgtgtgtgt 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaaataaaactaatggtaaggataattgtgtgtgtgtgtgtgtgtgtgtgtgtgt 557
Score = 56.8 bits (29), Expect = 2e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 329 tgtgtgtgtgtgtgtgtgtgtgtgtgtgt 357
|||||||||||||||||||||||||||||
Sbjct: 19 tgtgtgtgtgtgtgtgtgtgtgtgtgtgt 47
Score = 56.8 bits (29), Expect = 2e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 329 tgtgtgtgtgtgtgtgtgtgtgtgtgtgt 357
|||||||||||||||||||||||||||||
Sbjct: 21 tgtgtgtgtgtgtgtgtgtgtgtgtgtgt 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 3
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
