Query= MSMg01no445_g06.b1 MSMg01no445_g06.b1 CHROMAT_FILE:
MSMg01no445_g06.b1 PHD_FILE: MSMg01no445_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:34 2005
(242 letters)
>mm_chr1_156242441_156243083
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 caaagagtcatgctatgtactggaagatgcaaagagaaacatgggctttgagaaagcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagagtcatgctatgtactggaagatgcaaagagaaacatgggctttgagaaagcaac 260
Query: 61 ttccctttaaagagaaag-tacaggctctgatagctaggagggaaagctctggtcagcta 119
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccctttaaagagaaagatacaggctctgatagctaggagggaaagctctggtcagcta 320
Query: 120 caaggaaggaggttggcattcaagtttattaggaggcagtaggaaactggagattattat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaggaaggaggttggcattcaagtttattaggaggcagtaggaaactggagattattat 380
Query: 180 aataatgtgtttgtggcttaatagaaattcttctatgttctggtcttaatgaagggtaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataatgtgtttgtggcttaatagaaattcttctatgttctggtcttaatgaagggtaag 440
Query: 240 tgt 242
|||
Sbjct: 441 tgt 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_g06.g1 MSMg01no445_g06.g1 CHROMAT_FILE:
MSMg01no445_g06.g1 PHD_FILE: MSMg01no445_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:34 2005
(383 letters)
>mm_chr1_156435647_156436429
Length = 783
Score = 727 bits (376), Expect = 0.0
Identities = 381/383 (99%)
Strand = Plus / Minus
Query: 1 actttccatttttctgatggctcattcatctcgaggtgagatttagaggtagaagtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 actttccatttttctgatggctcattcatctcgaggtgagatttagaggtagaagtgatc 451
Query: 61 aatggacaggaggtaaatcaaagcatgcttaggaatggccaccaatcaagaagccttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aatggacaggaggtaaatcaaagcatgcttaggaatggccaccaatcaagaagccttgaa 391
Query: 121 atcccgaacacagcttctctcaacatgtcagagatgttctcttccaaggattcctaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atcccgaacacagcttctctcaacatgtcagagatgttctcttccaaggattcctaaaaa 331
Query: 181 gactgtactttcacagtgctacagtgggtgtcacggatgcagagagggagaagatttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gactgtactttcacagtgctacagtgggtgtcacggatgcagagagggagaagatttggt 271
Query: 241 tggttcctgtaaaggacttgtctaatagcatgaataataattgaagatggaaggtagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tggttcctgtaaaggacttgtctaatagcatgaataataattgaagatggaaggtagaaa 211
Query: 301 agagtagcatgggttggggttgtagctcatgtggnagagtatttgccgagcttgcatggg 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 210 agagtagcatgggttggggttgtagctcatgtggtagagtatttgccgagcttgcatggg 151
Query: 361 gtcttgagttcagtggatttcca 383
| |||||||||||||||||||||
Sbjct: 150 gccttgagttcagtggatttcca 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
