Query= MSMg01no445_h12.b1 MSMg01no445_h12.b1 CHROMAT_FILE:
MSMg01no445_h12.b1 PHD_FILE: MSMg01no445_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:41 2005
(483 letters)
>mm_chr1_53239818_53240701
Length = 884
Score = 665 bits (344), Expect = 0.0
Identities = 365/372 (98%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 113 actacatata-tttttaaaaaaatagtattcaagccaccttttctttcaaagtttatttc 171
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 313 actacatatattttttaaaaaaatagtattcaagccgccttttctttcaaagtttatttc 372
Query: 172 tctttcattcattttattcttccaattgacctgaattcagtattgaaatatcttaatatt 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tctttcattcattttattcttccaattgacctgaattcagtattgaaatatcttaatatt 432
Query: 232 tagtacttaatactttgtattttagtctaaattccctaaatgtcaattggtacttcttgg 291
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tagtacttaatactttgcattttagtctaaattccctaaatgtcaattggtacttcttgg 492
Query: 292 ttaagaggatgtttaaatatgtctttaaattcttaaatacaggaaaagcataaatatttt 351
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcaagaggatgtttaaatatgtctttaaattcttaaatacaggaaaagcataaatatttt 552
Query: 352 tgacatttgaaattatcatcataatcatcgttttttgctgttggatatctaatcaggctc 411
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 553 tgacatctgaaattatcatcataatcatcgttttttgctgttggagatctaatcaggctc 612
Query: 412 ttacacataacaggtgaagtatgagccacactctgagtacatttgaaatgaagtatgaga 471
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 613 ttacacataacaggtgaagtatgagccacactctgagcacatttgaaatgaagtatgaga 672
Query: 472 ggcaattttaga 483
||||||||||||
Sbjct: 673 ggcaattttaga 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 884
Length adjustment: 10
Effective length of query: 473
Effective length of database: 874
Effective search space: 413402
Effective search space used: 413402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_h12.g1 MSMg01no445_h12.g1 CHROMAT_FILE:
MSMg01no445_h12.g1 PHD_FILE: MSMg01no445_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:41 2005
(459 letters)
>mm_chr1_53371082_53371942
Length = 861
Score = 849 bits (439), Expect = 0.0
Identities = 455/461 (98%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 1 atttatttaaacaaaataatgaatgttatcttattttttaagtatgcagacttcaaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atttatttaaacaaaataatgaatgttatcttattttttaagtatgcagacttcaaaatt 515
Query: 61 ttaagaacatttgtaaaaacattatcaaaatcttttagaggtcctagaaatcactagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttaagaacatttgtaaaaacattatcaaaatcttttagaggtcctagaaatcactagata 455
Query: 121 ggaataaataaaattttgcaagagaaaaatgagaagcatataaaatgat--taatgtatc 178
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 454 ggaataaatcaaattttgcaagagaaaaatgagaagcatataaaatgattataatgtatc 395
Query: 179 aagttgagcacccccaaagtgaaagaagctctaaagcacgctaccacctgagttgttagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aagttgagcacccccaaagtgaaagaagctctaaagcacgctaccacctgagttgttagt 335
Query: 239 ggaaacacaaaaagtactaaaaatattattgtataaaattgccttagctgtgtttacagt 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggaaacacaaaaagtactaaaaatattattgtataaaattgccttagctgtgtttacagg 275
Query: 299 atgcaaatgaaacacgaatttcacatctatacctgggtttcatcctcaaattggtcacga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgcaaatgaaacacgaatttcacatctatacctgggtttcatcctcaaattggtcacga 215
Query: 359 atatggcacatcgcaaaattaaaaaaaaaatttttttgaaatttggaacacttctggtcc 418
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 214 atatggcacatcgcaaaattaaaaaaaatttttttttgaaatttggaacacttctggtcc 155
Query: 419 aggcattttgggtaaaccatgctcaacacgcactttataca 459
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aggcattttgggtaaaccatgctcaacacgcactttataca 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 861
Length adjustment: 10
Effective length of query: 449
Effective length of database: 851
Effective search space: 382099
Effective search space used: 382099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
