Query= MSMg01no447_h03.b1 MSMg01no447_h03.b1 CHROMAT_FILE:
MSMg01no447_h03.b1 PHD_FILE: MSMg01no447_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:21 2005
(219 letters)
>mm_chr1_187563382_187564001
Length = 620
Score = 368 bits (190), Expect = e-106
Identities = 208/214 (97%), Gaps = 1/214 (0%)
Strand = Plus / Minus
Query: 7 gaattctttctgattaccgtttcctctcctactatttcaagatgtaagaatctgaggagc 66
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 343 gaattctttctgattacagtttcctctcctactatttcaagatgtaagaatcagaggagc 284
Query: 67 agttagataaacccacctggaaaacacatctctaaaggtatgagtggcctattttggggt 126
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agctagataaacccacctggaaaacacatctctaaaggtatgagtggcctattttggggt 224
Query: 127 -gggggggggatgcatgattttaattaatctattataacaatataaaaactcaaatacat 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ggggggggggatgcatgattttaattaatctattataacaatataaaaactcaaatacat 164
Query: 186 ttaaaataaataaaaaatgggtttctgtaaagaa 219
||||||||||| |||| |||||||||||||||||
Sbjct: 163 ttaaaataaatgaaaagtgggtttctgtaaagaa 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 620
Length adjustment: 9
Effective length of query: 210
Effective length of database: 611
Effective search space: 128310
Effective search space used: 128310
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no447_h03.g1 MSMg01no447_h03.g1 CHROMAT_FILE:
MSMg01no447_h03.g1 PHD_FILE: MSMg01no447_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:21 2005
(295 letters)
>mm_chr1_187395876_187396573
Length = 698
Score = 530 bits (274), Expect = e-155
Identities = 291/298 (97%), Gaps = 3/298 (1%)
Strand = Plus / Plus
Query: 1 ctcatgactttaggcacttttcccctatgttacaaaggcacagaggaaaagacccccccc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcatgactttaggcacttttcccccatgttacaaaggcacagaggaaaagacccccccc 260
Query: 61 ---tttttttttgcttgctcaagagtagaaatttagggggaaaaggtcactcattcttat 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttttttttttgcttgctcaagagtagaaatttagggggaaaaggtcactcattcttat 320
Query: 118 ctcacaaaagaaaatttattcatctgttctcaagaaaagaagttttagcatgtacaaata 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcacaaaagaaaatttattcatctgttctcaagaaaagaagttttagcatgtacaaata 380
Query: 178 gaggggctgctaagagcttgccagcaatatccaccccagtcttaggccctgtggagggac 237
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 381 gaggggctgctaagagcttgccagcaatacccaccctagtcttaggccctgtggagggac 440
Query: 238 agggaccccaggtgaaggggggtgtcactctaagggacttcttctgttaaagttagaa 295
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 agggaccccaggtgaaggggggtgtcactctaagggacttcttctgctaaagttagaa 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 698
Length adjustment: 9
Effective length of query: 286
Effective length of database: 689
Effective search space: 197054
Effective search space used: 197054
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
