NAAGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTTTGTTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGT
TCCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGC
TGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACTTAGATTTGACCTTAATACAAGGAGATAAGTATGGATCGAT
TCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCCCTGGATGGTTTTAGCTCCCTTGTCGAAGATC
AAATGACCATAGGTGTGTGGGTTCATTTCTAGGTCTTCAATTCTATTCCA
TTGGTCTACTTTTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAA
TTGCTCTGTTATAAAGCTTTAGGCCAAGGATGTTGATTCCACCAGAGGTT
CTTTTATCTCTGAGAAGAATTTTTGCTATCCTAG

TTTCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACCTTTGTTTGTTTGTTTTT
GTTTGTTTGTTTGCAATGTACTGTGCATTGTCTTCAATATTGCAGAGCCA
AGATGGAGTAGAGGAACTTTGATACAACCAACAGATGATGAAATTTACTG
TAGAGAGCTTATTTATACCCTAACCCCCTCACTGCGTGGTCCTAGAAAAA
TGGTGTGCATTGGGCAGCAGCTAGATTTTCAAAGGGGATTAAGTTCAATT
ATAGCAGAGACGATGGGGAGTTTCAGTGAAACAGTACACATGCAAGCACT
TGAACTAAACAAATGTTACTCGGATGTCTCTCCTCCAAAGCCAGCATTGT
GCAAGAACTCTGTGTTTCTAGTCTTCGCAAACTAATTTCACTGACCAGCT
GAATTCATGCCATGCACAAATTAATCCCTGTTGAATGAATATTATTTTCA
GAATCAGATTGCAAGGTCCTTGTCGGGAAGGGGGGGGGGTGGGNNTTTTT
TCCTTTGTTTTTGGTTCGTGTGTTGTTTATTGTATTTCATGTTCCTTTTT
CTTCCTTCCCAACCCCCCTTTCTTCTCTTTCTCCTCTTCCCTCCTAACTT
CTCTTCTCTCACTTTATCTTCCTATTCTTTGATTTCCTATTCTCTCCTTC
CATCTTCTCCCCTCTCCTTCTTCTTTTCCTCCCTCTTCTTCTCTTCTTTT
CTTTCCTCCTTTCCTTAT

Query= MSMg01no447_i22.g1 MSMg01no447_i22.g1 CHROMAT_FILE:
MSMg01no447_i22.g1 PHD_FILE: MSMg01no447_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:29 2005
         (422 letters)



>mm_chr1_139371049_139371870
          Length = 822

 Score =  774 bits (400), Expect = 0.0
 Identities = 403/404 (99%)
 Strand = Plus / Plus

                                                                       
Query: 19  tttgtttgtttgtttgcaatgtactgtgcattgtcttcaatattgcagagccaagatgga 78
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 219 tttgtttgtttgtttgcaatgtactgtgcattgtcttcagtattgcagagccaagatgga 278

                                                                       
Query: 79  gtagaggaactttgatacaaccaacagatgatgaaatttactgtagagagcttatttata 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtagaggaactttgatacaaccaacagatgatgaaatttactgtagagagcttatttata 338

                                                                       
Query: 139 ccctaaccccctcactgcgtggtcctagaaaaatggtgtgcattgggcagcagctagatt 198
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccctaaccccctcactgcgtggtcctagaaaaatggtgtgcattgggcagcagctagatt 398

                                                                       
Query: 199 ttcaaaggggattaagttcaattatagcagagacgatggggagtttcagtgaaacagtac 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttcaaaggggattaagttcaattatagcagagacgatggggagtttcagtgaaacagtac 458

                                                                       
Query: 259 acatgcaagcacttgaactaaacaaatgttactcggatgtctctcctccaaagccagcat 318
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acatgcaagcacttgaactaaacaaatgttactcggatgtctctcctccaaagccagcat 518

                                                                       
Query: 319 tgtgcaagaactctgtgtttctagtcttcgcaaactaatttcactgaccagctgaattca 378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgtgcaagaactctgtgtttctagtcttcgcaaactaatttcactgaccagctgaattca 578

                                                       
Query: 379 tgccatgcacaaattaatccctgttgaatgaatattattttcag 422
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tgccatgcacaaattaatccctgttgaatgaatattattttcag 622


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space:   335769
Effective search space used:   335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)