Query= MSMg01no447_k04.b1 MSMg01no447_k04.b1 CHROMAT_FILE:
MSMg01no447_k04.b1 PHD_FILE: MSMg01no447_k04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:36 2005
(239 letters)
>mm_chr1_58326181_58326826
Length = 646
Score = 418 bits (216), Expect = e-121
Identities = 237/246 (96%), Gaps = 7/246 (2%)
Strand = Plus / Minus
Query: 1 atccaatcaggaatgcatgttgtgcagtgagacta-ttttttttagttgtcctgacatca 59
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 446 atccaatcaggaatgcatgttgtgcagtgagactatttttttttaattgtcctgacatca 387
Query: 60 tgagtttgtgggttaggttctaggaaacgtagattatt-ggggggaattaaaagattgaa 118
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 386 tgagtttgtgggttaggttctaggaaacgtagattattgggggggaattaaaagattgaa 327
Query: 119 ttaaacatttagaggcacatattttcatcctcactttggagtaggacacagtaag-cttt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 326 ttaaacatttagaggcacatattttcatcctcactttggagtaggacacagtaagacttt 267
Query: 178 ctcctgctggtctctgctccctattctggt----gtgtgatgtactcaggcaacctggac 233
|||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 266 ctcctgctggtctctgctccctattctggtgtgagtgtgatatactcaggcaacctggac 207
Query: 234 gtggag 239
||||||
Sbjct: 206 gtggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 646
Length adjustment: 9
Effective length of query: 230
Effective length of database: 637
Effective search space: 146510
Effective search space used: 146510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no447_k04.g1 MSMg01no447_k04.g1 CHROMAT_FILE:
MSMg01no447_k04.g1 PHD_FILE: MSMg01no447_k04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:36 2005
(217 letters)
>mm_chr1_58183968_58184584
Length = 617
Score = 412 bits (213), Expect = e-120
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 1 aggtgtttcatctagcaaggggtcttttgctgtgttctaccttgacaaaaggcaatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgtttcatctagcaaggggtcttttgctgtgttctaccttgacaaaaggcaatgatg 260
Query: 61 gaagagacttgggggtaaagggaagccaaaggggtccaagtttgtcctttaaatattaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagagacttgggggtaaagggaagccaaaggggtccaagtttgtcctttaaatattaat 320
Query: 121 cttccctggctgccctggcattcgtccattcttgggtgagaactccctctaagacaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccctggctgccctggcattcgtccattcttgggtgagaactccctctaagacaatca 380
Query: 181 ccatcagtatgagctccagaggacgtgcactga 213
|||||||||||||||||||||||||||||||||
Sbjct: 381 ccatcagtatgagctccagaggacgtgcactga 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|