Query= MSMg01no447_p24.b1 MSMg01no447_p24.b1 CHROMAT_FILE:
MSMg01no447_p24.b1 PHD_FILE: MSMg01no447_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:06 2005
(410 letters)
>mm_chr1_99861714_99862523
Length = 810
Score = 746 bits (386), Expect = 0.0
Identities = 401/406 (98%)
Strand = Plus / Plus
Query: 5 gaattccttttcctttatttaaattttacttaatggatctttagcgacagcaagcactat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttttcctttatttaaattttacttaatggatctttagcgacagcaagcactat 264
Query: 65 ttcaggctcaatagatacagcaatgaacaagaccacaaggcattgccatcagtctgggtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcaggctcaatagatacagcaatgaacaagaccacaaggcattgccatcagtctgggtc 324
Query: 125 aggacttcagtaaggtggtgatagtggaaattcacacattcatacgtcacatgttcagtg 184
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 aggactttagtaaggtggtgatagtggaaattcacacattcatacatcacatgttcagtg 384
Query: 185 tttgcctattgtcttaaggaaatgctttgaattggtggacaaaactgcacgcatttacca 244
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 tttgcctattgtcttaaggaaatgctttgaattggtggacaaaactgcatgcatttaccg 444
Query: 245 tggaaagcatgttgtttcagcagacccctagatttagctaattgtcacacatactgtttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggaaagcatgttgtttcagcagacccctagatttagctaattgtcacacatactgtttc 504
Query: 305 atttgattatcatttttatgattagactatacatgggaaatctatacagtgcatctcaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atttgattatcatttttatgattagactatacatgggaaatctatacagtgcatctcaag 564
Query: 365 aaagtcagagtgcacgtatctcagtgaagagatacagtatcatctg 410
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 565 aaagtcagagtgcacgtatctcagtgaagagatacggtatcatctg 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_p24.g1 MSMg01no447_p24.g1 CHROMAT_FILE:
MSMg01no447_p24.g1 PHD_FILE: MSMg01no447_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:06 2005
(371 letters)
>mm_chr1_100002690_100003461
Length = 772
Score = 456 bits (236), Expect = e-133
Identities = 248/252 (98%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 1 ctagtcagtgttgtaatgagcaatacatggcaggcaggatgctgcgaggttttaggacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctagtcagtgttgtaatgagcaatacatggcaggcaggatgctgcgaggttttaggacac 393
Query: 61 acagatgaaatacgcagggtatgaatcccaggagaggtgggtagcaatggggcttcctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 acagatgaaatacgcagggtatgaatcccaggagaggtgggtagcaatggggcttcctaa 333
Query: 121 gaaggagtaatagttaggggcagagagaaaaggcattccagacaggaaaaatttaagtaa 180
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 332 gaaggagtagtagttaggggcagagagaaaaggcattccagacaggaaaaaattaagtaa 273
Query: 181 gaaaatcttaagggcacag-atatggattgaagaagagaaagaaaacagtgcaaaggctg 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 272 gaaaatcttaagggcacagaatatggattgaagaagagaaagaaaacagtgcaaaagctg 213
Query: 240 gccaatttagcc 251
||||||||||||
Sbjct: 212 gccaatttagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 772
Length adjustment: 9
Effective length of query: 362
Effective length of database: 763
Effective search space: 276206
Effective search space used: 276206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
