Query= MSMg01no448_i20.b1 MSMg01no448_i20.b1 CHROMAT_FILE:
MSMg01no448_i20.b1 PHD_FILE: MSMg01no448_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:52 2005
(406 letters)
>mm_chr1_161218656_161219461
Length = 806
Score = 714 bits (369), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Plus
Query: 4 gaattcctagaccatttttattaaagctaaaagatcacctaattaatttgagcatactgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctagaccatttttattaaagctaaaagatcacctaattaatttgagcatactgc 263
Query: 64 tttttaaaaaaatcttcaaaaatactttttatttaaaaataattttttaatatgaggata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttttaaaaaaatcttcaaaaatactttttatttaaaaataattttttaatatgaggata 323
Query: 124 ttgttctttgcttcctttatagtgtcattcatttaatttgctttttttctgacccagatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgttctttgcttcctttatagtgtcattcatttaatttgctttttttctgacccagatg 383
Query: 184 acagtagaactgcaagccagttagatgaatttcaagaatgcttgtccaagtttactcgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagtagaactgcaagccagttagatgaatttcaagaatgcttgtccaagtttactcgat 443
Query: 244 acaactcagtaagaccgttggccacattgtcttatgctagcgatctctataatggttcca 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 acaactcagtaagaccgttggccacattgtcttatgctagtgatctctataatggttcca 503
Query: 304 gcatagcttctaggtaagtgtttgccactgctcttactgtgttcttttattaaaaagtat 363
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcatagtttctaggtaagtgtttgccactgctcttactgtgttcttttattaaaaagtat 563
Query: 364 aagaaaacttactaaat 380
|||||||||||||||||
Sbjct: 564 aagaaaacttactaaat 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_i20.g1 MSMg01no448_i20.g1 CHROMAT_FILE:
MSMg01no448_i20.g1 PHD_FILE: MSMg01no448_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:52 2005
(383 letters)
>mm_chr1_161369275_161370056
Length = 782
Score = 687 bits (355), Expect = 0.0
Identities = 376/383 (98%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 1 aatatgcattattcagaaacaagatagcttttgaaaaggctccagactctgatggaattt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aatatacattattcagaaacaagatagcttttgaaaaggctccagactctgatggaattt 471
Query: 61 gaaaaataaataaataaaaggaaaaaaacaaaagagctctaaatgccctgtacagacaaa 120
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 470 gaaaaataaataaataaaa-gaaaaaaataaaagagctctaaatgccctgtacagacaaa 412
Query: 121 ggtcactgccacagcaagaagcaattaatagcctagtcctgcctggcgctcttcaccctt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 411 ggtcactgccacagcaagaagcaattaatagcctagtcctgcctggggctcttcaccctt 352
Query: 181 tccatcatttcagaaactgagagatggagccttccttaaaagagaagaaagcagtcacat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 351 tccatcatttcagaaactgagagatggagccttccttaaaagagaagaaagcagccacat 292
Query: 241 tcttcctaccacttccaccactggagagggatcatattagaggctgagttctgagcggaa 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcttcctaccacttccaccattggagagggatcatattagaggctgagttctgagcggaa 232
Query: 301 gcctttgcactcctaagagggcccagcaggtgaaaggactgagggagagaggaaaggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gcctttgcactcctaagagggcccagcaggtgaaaggactgagggagagaggaaaggaag 172
Query: 361 gaaagagggggaagcagggagga 383
|||||||| ||||||||||||||
Sbjct: 171 gaaagaggaggaagcagggagga 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 782
Length adjustment: 9
Effective length of query: 374
Effective length of database: 773
Effective search space: 289102
Effective search space used: 289102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
