NCCCTACTTTAATTTGCGGCGCTAAACGACTACTATAGGTCGAGAATCCG
CGGAATTCTTTTTAATTTCCCAAACCCAAACAAACAAGAAAACAAAACTA
AAAGCCAGGGAGGGCAATTTTGGCTGTGTGGGAGATGGAATAAATACCTT
CTGAGTCAGTTACCTATTCAAAGCTCTCCTGGGATCTGCACACTGCATGA
GAGCAAAGCTGGAGCTACTTAGTAATGCCTACCTTGACTCCCCATTAAAA
GTCCCAAGACACACCTCACTCACCTTTCCTGTCTCCAACCCTGCTATATT
TCATTTTCTAAAATGTACTACATATTTTACTGACTTATTGGTTGTTGTTT
AACATCTGTATCTTCTATAAAAACATTTTTAGGGCTGGTGAGATGGCTCA
GTGGGTAAGAGCACCCGACTGCTCTTCCAGAGGTCCAGAGTTCTCAAATC
CCAGCAACCACATGTTGGCTCACAACCATCCGTAACGAGATCTGACTCCC
TCTTCTGGAGTGTGCGAGGACAGCTACAGTGTACTTACTTATTATAAGAA
ATTATATCCTTTAATAAATACCATTTTTTAACAGACACAGGCTGCTTTGT
TAACCTAATTCCAGTCGTCTATTAATACTTCCTGGCCTCTCACCTTGATC
AACTATAAAAAAACGTGGGTTAACATCCCTGTAGTTTTCCCATACACCTT
CATTTCAGTCGTTGTTTAAAGGTTCCTTAACAGACAAAACG

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCCGTCTGGCGGTTCCTCTTAATATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGTTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAAGAAT
GAATTTATGAAATTCCTAGCCAAATGGATGGACCTTGGAGGGCATCATCC
TGAGTGAGGTAACACATTTCCCAAGGGAATCCCACATATGGACTTCCCTG
AAAAGGGGAATTAACCCCAAACCTAGGATCCCCCCCAAATAAAAACAATT
TTCTTAACACATGGAACTCCTCAAAAATGAAAAATGGAAGGGGGGGCCCT
TCCCCCCCCCTCACAAATGGAAACAAAN

Query= MSMg01no448_n15.b1 MSMg01no448_n15.b1 CHROMAT_FILE:
MSMg01no448_n15.b1 PHD_FILE: MSMg01no448_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:16 2005
         (457 letters)



>mm_chr1_45878267_45879123
          Length = 857

 Score =  795 bits (411), Expect = 0.0
 Identities = 426/431 (98%), Gaps = 2/431 (0%)
 Strand = Plus / Minus

                                                                       
Query: 24  aaacccaaacaaacaagaaaacaaaactaaaagccagggagggcaattttggctgtgtgg 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aaacccaaacaaacaagaaaacaaaactaaaagccagggagggcaattttggctgtgtgg 474

                                                                       
Query: 84  gagatggaataaataccttctgagtcagttacctattcaaagctctcctgggatctgcac 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gagatggaataaataccttctgagtcagttacctattcaaagctctcctgggatctgcac 414

                                                                       
Query: 144 actgcatgagagcaaagctggagctacttagtaatgcctaccttgactccccattaaaag 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 actgcatgagagcaaagctggagctacttagtaatgcctaccttgactccccattaaaag 354

                                                                       
Query: 204 tcccaagacacacctcactcacctttcctgtctccaaccctgctatatttcattttctaa 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tcccaagacacacctcactcacctttcctgtctccaaccctgctatatttcattttctaa 294

                                                                       
Query: 264 aatgtactacatattttactgacttattggttgttgtttaacatctgtatcttctataaa 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aatgtactacatattttactgacttattggttgttgtttaacatctgtatcttctataaa 234

                                                                       
Query: 324 aacatttttagggctggtgagatggctcagtgggtaagagcacccgactgctcttccaga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 233 aacatttttagggctggtgagatggctcagtgggtaagagcacccgactgctcttcc-ga 175

                                                                       
Query: 384 -ggtccagagttctcaaatcccagcaaccacatgttggctcacaaccatccgtaacgaga 442
            |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 174 aggtccagagttctcaagtcccagcaaccacatggtggctcacagccatccgtaacgaga 115

                      
Query: 443 tctgactccct 453
           |||||||||||
Sbjct: 114 tctgactccct 104


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space:   378609
Effective search space used:   378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)